Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0244 ATGGCTTCCAATTCTACATCTGGAAATGCTTGCCCGGCGCCTATGAAAGCCACATCAAATGGCGTGTTTCAGGGAGACGACCCTCTTGATTTTGCGCTTCCCCTAGCTATTTTGCAGATATGCCTTGTTCTCGTGGTCTCAAGGGGACTGGCATATCTTCTAAAACCCTTAAGGCAACCCAGAGTTATTGCAGAGATTATTGGAGGGATACTTCTTGGTCCATCAGCTCTTGGACGGAATAAAAGCTATATGCAGGCAGTTTTCCCACCCAGGAGTATTACAGTATTAGACACTCTAGCAAACATTGGCCTTATATTCTTTCTATTCTTAGCAGGTCTGGAGTTAGATCTTAAATCTCTTCGTCAATCTGGAAACCGAGTCCTTGCTATTGCAATGGCTGGAATAAGCCTACCCTTTGTAATAGGAATTGGTTCATCATTTGTTCTAAAACAATCAATTGCCAAAGGTTCAGATAGTGCCGCATTTCTTGTATTCATGGGTGTTGCTCTGTCCATTACTGCATTTCCTGTATTGGCCCGTATTTTGGCTGAGTTAAAACTTCTAACCACAAACGTTGGCAGAACAGCTATGTCAGCTGCAGCAATTAATGATATAGCTGCCTGGATTCTGCTTGCTCTGGCTGTTGCCTTGTCAGGCCATGAGCGATCTCCACTTGTGTCATTGTGGGTCTTCTTAGCGGGGTGTGGTTTTGTCATTTGTGCAATAATCATTGTCCCTCCAATTTTCAAATGGGTGAGCCAACGATGCCATGAAGGTGAACCAGTTGAAGAGGTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGCTTGTCACAGATGCTATTGGAATCCATGCCATGTTTGGTGCTTTTGTTGTTGGAGTTTTGCTCCCCAACGATGGACCGTTTGCCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGTCTATTTCTCCCTCTCTATTTTGTGTCAAGTGGATTGAAGACTAATGTAGCCACCATAAAGGGGCTGCAATCATGGGGTCTTCTGGCTTTTGTTATATTTACAGCTTCTTTCGGAAAGATTCTTGGGACTTTTGTTGTTTCCCTTCTCTGTAAACTACCTCTTAACGAGGCTCTGGTGCTGGGGTTCTTAATGAATTGCAAAGGCCTAGTTGAATTAATAGTCCTGAACATTGGCAAAGATAGAAAGGTTTTGAATGATCAGACCTTCGCCATCATGGTTCTTATGGCTGTTTTCACTACCTTCATCACTACTCCTCTTGTGATGGCCGTGTATAAGCCTGCAAGGAAGAGAAGCATAGCCGACTACAAATATAGAACAATTGAGAGGAAAAATGCAAATAGACAACTGAGGATTCTCGCCTGCTTCCATGGTGCAAGAAATATTCCATCAATGATAAATTTGATTGAGGCTTCAAGAGGAATCCAGAAGCGTGATGATCTTTGTGTGTACGCAATGCACCTTAAAGAATTCTCTGAGAGGTCCTCATCTATATTAATGGTACATAAGGCAAGAAGAAATGGGTTGCCATTCTGGAACAAAGGTTCTCATTCACCTTCTAACCATGTCATTGTAGCGTTTGAGGCTTACAGGCAACTAAGTCAAGTGTCCATCCGGCCAATGACCGCCATCTCATCTATGGCTAACATACATGAAGACATTTGTGCAACTGCTGAGAGGAAGGAAGCCGCAGTCATCATTCTTCCATTTCATAAGCATCAAAGTTTGGATGGTTCACTAAATACCAGTAGAAATGATTTTCGATGGGTTAACAAAAGAGTACTTGAGCATGCGCCATGCTCAGTTGGAATTTTTGTTGATCGTGGGCTCGGTGGTACCTCCCATGTCTCTGCAAGTAATGTTTCTTACCGTGTTACAGTGCTTTTCTTTGGTGGTGGTGATGATCGTGAAGCCCTTGCTTACGGAGGTCGTATGGCCGAGCATCCTGGCATCACATTGTTGGTTATTCGCTTTGTAGTTGAACCACCTAATGAAACAGAGATTTTAAGAGTTGATGTGGGCGACTCCTCCTCCAGCACCAAATTAGTCTCACAGGATGAACAATTCCTCGATGAATTTAAAGTGAAAACAGCAAATGATGACTCCATCAACTATGAAGAGAGAATAGTTAAAAATGCAGCAGAAACAGTTGCTATTATCCGTGAGGTTAATAGCTCAAGTCTGTTTCTTGTGGGTTCAAGGCCAGTCAGTGAAGTTGCCTGTGCTCTGAAAAGCAGTGAATGCCCTGAACTAGGACCTGTGGGTGGTTTGTTGGTATCACAAGATTTCCCCACAACAGCATCCGTTTTGGTAATACAACAGTATAACAACGATGGGGCGCCAATAAATTTGACGCCGGAAATGGAGGAACAATTACCCTATCAGGATTCAGGTTCTGCTGCATAA 2421 0.4341 MASNSTSGNACPAPMKATSNGVFQGDDPLDFALPLAILQICLVLVVSRGLAYLLKPLRQPRVIAEIIGGILLGPSALGRNKSYMQAVFPPRSITVLDTLANIGLIFFLFLAGLELDLKSLRQSGNRVLAIAMAGISLPFVIGIGSSFVLKQSIAKGSDSAAFLVFMGVALSITAFPVLARILAELKLLTTNVGRTAMSAAAINDIAAWILLALAVALSGHERSPLVSLWVFLAGCGFVICAIIIVPPIFKWVSQRCHEGEPVEEVYICATLAAVLAAGLVTDAIGIHAMFGAFVVGVLLPNDGPFASALVEKVEDLVSGLFLPLYFVSSGLKTNVATIKGLQSWGLLAFVIFTASFGKILGTFVVSLLCKLPLNEALVLGFLMNCKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVMAVYKPARKRSIADYKYRTIERKNANRQLRILACFHGARNIPSMINLIEASRGIQKRDDLCVYAMHLKEFSERSSSILMVHKARRNGLPFWNKGSHSPSNHVIVAFEAYRQLSQVSIRPMTAISSMANIHEDICATAERKEAAVIILPFHKHQSLDGSLNTSRNDFRWVNKRVLEHAPCSVGIFVDRGLGGTSHVSASNVSYRVTVLFFGGGDDREALAYGGRMAEHPGITLLVIRFVVEPPNETEILRVDVGDSSSSTKLVSQDEQFLDEFKVKTANDDSINYEERIVKNAAETVAIIREVNSSSLFLVGSRPVSEVACALKSSECPELGPVGGLLVSQDFPTTASVLVIQQYNNDGAPINLTPEMEEQLPYQDSGSAA* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0244 806 Pfam Sodium/hydrogen exchanger family 42 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra11g0244 806 PANTHER CATION/H(+) ANTIPORTER 18 7 794 - -
Vra11g0244 806 Gene3D - 521 754 - -
Vra11g0244 806 PANTHER CATION/H + ANTIPORTER 7 794 - -
Vra11g0244 806 Gene3D - 35 439 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0244 Vra-Chr11 1661301 1665617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0244 1 804 Antiporter Super Family AT5G41610 68.927 0.0 1105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0244 - - gmx:100810155 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0244 11 1661301 1665617 Vra11g0244 11 1661301 1665617 ECH