LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra11g0237	ATGGAACAGTTCCGGCATATCGGAGAGGTGGTTGGGAGTCTGAAAGCGCTTATGGTTCTGCGCGATGAAATCCAAATCAACCAACGGCAATGCTGTTTGATCCTGGACATATTCAGTTTGGCGATGGATACGATCGCAGAGGAGATGCGGCAGAACCTGAAGCTGGAAGAGAGGAACGGCAAATGGAAGGCTCTGGAATCTCCTCTGACAGAGTTGTGCAGGGTTTTCAAGGAGGGAGAGCATTACATAAAGCAGTGTTTGGATTCCAAACATTGGTTGGGGAAAGCCATTACCCTCTCTCACCACCGAGACTGCGTGGAATTCCACATCCACAACCTTCTCTGCTATTTCCCGGCGGTGATCGAGGCGATCGAAATTGCAGGGGAGATTACGGGTTTAGATCCGGAGGAGAAGGCAAAGAAGAAGGTGATACTGGGTCGGAAGTATGACGTGGAATGGAAGGACCCAGAGCTGTTCCAATGGAGGTTCGGGAAGCAGTACCTGGTCCCGCGCGGGATTTGCAAGAACTTGGAGAATGCCTGGAGAGAGGACAGGTGGAGGCTCATCGAGGCCATCAAGGACAAGACTGCGAAGGAAGGTGGTTCAGCTGTGTTTAGGGAGAGCGAGCATGGCCTCGCTGTTATGCTCCTCAAAAAGCTTCTCAATGGGTCGGAGATCGGCCCAATTGCGCTGCTTGTTGGGTCCAAAGATTTCCAGGTGAGACGGAGGTTGGGTCACCGGAAGGACTTAAAGGAAATCCAATGGTTGGGGCAAAGTTTCGCGATGAGGAACTTTCAAGGGGACAGAGAAGCACACCAGACTGAGGTCTCCTCTATTCTCTCGCTTTCACACCCCAACATATTGCAATACCTTTGCGGGTTTTACGACGAGGAGAAGAAAGAGTTCTCTCTTGTGATGGAGTTAATGAACAAGGATCTGTGGACTTACATGAAAGAGAATTGTGGTCCTAGGAGGCAGATTCTATTCTCTATCCCTGTTGTGGTGGATCTCATGCTTCAGATGGCCAGAGGAATGGAGTACCTGCATTCCCAAAACATTTGCCATGGACACCTTAACCCTTGTAATATTTACCTCAAGAAAATGAATTCCCAAGAGGATTATTTTCAGGCAAAGGTTGCAGGCTTTGCCTTGTCTTCTGTCAACAATGCTAGTACTAACGATACTGCCATCCAAGACTTTAACCCTTTAACCTGGTATGCTCCTGAAGTTTTGTCCCGGTTGGAACAAAAGAATGGTGGTGCTTCTTCTTCTAAGGAAGCCGATGCCTACAGCTTTGGGATGATATGCTTCCAGTTGTTGACAGGAAAAGTGCCTTTTGAAGATAACCACCTTCAAGGAGACAGAATTAGACAAAACATAAAGGTCGGCGAGAGACCTTTGTTTCCTTACCGTTCCCCGAAATACCTTGTGAATTTGATCAAGAAGTGCTGGCAAACTGACCCTGCTCAGCGTCCCAGCTTCTCGTCCATATGTAGGATTTTGCGGTACACCAAAAAGTTCCTTGCCATGAATTCAGAGTCCCAACTCATCAACCCTGAGCTCAACTTTCTTGAGGTTCCACCTGTGGATTTCTTTGAGATAGAGACAACGTTCCTAAAGAGCTCTTCAACCGAGAGGTCATCTTGTGTGTCCGCTGTGTCCCAGATACCCTATGAAATGTTTGCTTATAAGGTTGAGGAGAAAGCGAAAATGAATCCTAACAACAGTACTACCAAAGATGAGTGCTGCGAGCACCACCAAAAGGATGGGTGTAGGAGTGAAAGTGACGACCCAAGTGCAGAGTGCGATAGTGATAACGCCTCCATAGTGACAGATTCGCTCCCTCAAACAACCCATCCTACATCTATTTGCAGTGACGCACAGTTTGTTTCCTCTGAAGTCCCCTACAAGAAAACGGTTAGAATAAAGAACCAAACACATGTGAAGGCAAAGAATGAACAAGAAAAACAAATAATGCGGGCGACAAAATCATTTCGACCGTCTTTATCGAATCGAGTTTCAAGGACGAGAAAGGTGAATACATCATCATTTCCACCAAGCAATTTGAGTCCAAGTAGATCTTTGCTGGGGTCTCAATCGGATGGCAACTCCAAAGGGAATCGATCAGCGTCACCACCAGCATCACCATCACTACCCATTCCTTCAAGGAAAAAACACGATGGCAATTTGTCGGATACTAAGACAAGTGTAAGGTTGAAAAAAATGGATCAGTCAACATTACCTAGATATGGCAGCATGACAGATAGCTCAAGGATGAAGAAGTCACAAATGACGTCGAACCAATCTTTGAGCGTGGGAAGAATGAGACGTGCCAACACTGAGACCGATTTGAAGGGGCTCACGCGAACCAATCTACTGAGCACTCCAAGATTATCCACAAGGAGCAGAAAAGGTGGTAATGTCTCGGTTTCGGACAGCGGTTCAAGGATGACAACAGGTGGGTTTTCGCCGTGGGCATTGAGTCCCCAAAGCCCCCATTTAAGAACAAATAAAGCAACCTGTCATCTCTCTGACTACGAAAGCAGTTTTGTGAAGAAAAGAGGAAGCATGTCACCGTTCGCAACTTGTGGCCATGTCTCGGATTAA	2607	0.4699	MEQFRHIGEVVGSLKALMVLRDEIQINQRQCCLILDIFSLAMDTIAEEMRQNLKLEERNGKWKALESPLTELCRVFKEGEHYIKQCLDSKHWLGKAITLSHHRDCVEFHIHNLLCYFPAVIEAIEIAGEITGLDPEEKAKKKVILGRKYDVEWKDPELFQWRFGKQYLVPRGICKNLENAWREDRWRLIEAIKDKTAKEGGSAVFRESEHGLAVMLLKKLLNGSEIGPIALLVGSKDFQVRRRLGHRKDLKEIQWLGQSFAMRNFQGDREAHQTEVSSILSLSHPNILQYLCGFYDEEKKEFSLVMELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGMEYLHSQNICHGHLNPCNIYLKKMNSQEDYFQAKVAGFALSSVNNASTNDTAIQDFNPLTWYAPEVLSRLEQKNGGASSSKEADAYSFGMICFQLLTGKVPFEDNHLQGDRIRQNIKVGERPLFPYRSPKYLVNLIKKCWQTDPAQRPSFSSICRILRYTKKFLAMNSESQLINPELNFLEVPPVDFFEIETTFLKSSSTERSSCVSAVSQIPYEMFAYKVEEKAKMNPNNSTTKDECCEHHQKDGCRSESDDPSAECDSDNASIVTDSLPQTTHPTSICSDAQFVSSEVPYKKTVRIKNQTHVKAKNEQEKQIMRATKSFRPSLSNRVSRTRKVNTSSFPPSNLSPSRSLLGSQSDGNSKGNRSASPPASPSLPIPSRKKHDGNLSDTKTSVRLKKMDQSTLPRYGSMTDSSRMKKSQMTSNQSLSVGRMRRANTETDLKGLTRTNLLSTPRLSTRSRKGGNVSVSDSGSRMTTGGFSPWALSPQSPHLRTNKATCHLSDYESSFVKKRGSMSPFATCGHVSD*	869

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra11g0237	868	PANTHER	SERINE/THREONINE KINASE FAMILY PROTEIN	1	713	-	-
	Vra11g0237	868	MobiDBLite	consensus disorder prediction	602	622	-	-
	Vra11g0237	868	MobiDBLite	consensus disorder prediction	797	816	-	-
	Vra11g0237	868	MobiDBLite	consensus disorder prediction	573	622	-	-
	Vra11g0237	868	PANTHER	SERINE-THREONINE PROTEIN KINASE	1	713	-	-
	Vra11g0237	868	MobiDBLite	consensus disorder prediction	725	739	-	-
	Vra11g0237	868	MobiDBLite	consensus disorder prediction	579	599	-	-
	Vra11g0237	868	Gene3D	Transferase(Phosphotransferase) domain 1	240	521	-	-
	Vra11g0237	868	MobiDBLite	consensus disorder prediction	747	775	-	-
	Vra11g0237	868	MobiDBLite	consensus disorder prediction	646	660	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra11g0237	Vra-Chr11	1599872	1603760	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vra11g0237	275	501	MAP Kinase Kinase Kinase	AT5G58950	28.448	3.50e-23	102

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_Gdt	Vra11g0237		PK_Tyr_Ser-Thr	2.1e-34	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra11g0237	-		-	vra:106776526	1727.61

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vra11g0237	11	1599872	1603760	Vra11g0237	11	1599872	1603760	ECH

Showing 1 to 1 of 1 entries