Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0237 ATGGAACAGTTCCGGCATATCGGAGAGGTGGTTGGGAGTCTGAAAGCGCTTATGGTTCTGCGCGATGAAATCCAAATCAACCAACGGCAATGCTGTTTGATCCTGGACATATTCAGTTTGGCGATGGATACGATCGCAGAGGAGATGCGGCAGAACCTGAAGCTGGAAGAGAGGAACGGCAAATGGAAGGCTCTGGAATCTCCTCTGACAGAGTTGTGCAGGGTTTTCAAGGAGGGAGAGCATTACATAAAGCAGTGTTTGGATTCCAAACATTGGTTGGGGAAAGCCATTACCCTCTCTCACCACCGAGACTGCGTGGAATTCCACATCCACAACCTTCTCTGCTATTTCCCGGCGGTGATCGAGGCGATCGAAATTGCAGGGGAGATTACGGGTTTAGATCCGGAGGAGAAGGCAAAGAAGAAGGTGATACTGGGTCGGAAGTATGACGTGGAATGGAAGGACCCAGAGCTGTTCCAATGGAGGTTCGGGAAGCAGTACCTGGTCCCGCGCGGGATTTGCAAGAACTTGGAGAATGCCTGGAGAGAGGACAGGTGGAGGCTCATCGAGGCCATCAAGGACAAGACTGCGAAGGAAGGTGGTTCAGCTGTGTTTAGGGAGAGCGAGCATGGCCTCGCTGTTATGCTCCTCAAAAAGCTTCTCAATGGGTCGGAGATCGGCCCAATTGCGCTGCTTGTTGGGTCCAAAGATTTCCAGGTGAGACGGAGGTTGGGTCACCGGAAGGACTTAAAGGAAATCCAATGGTTGGGGCAAAGTTTCGCGATGAGGAACTTTCAAGGGGACAGAGAAGCACACCAGACTGAGGTCTCCTCTATTCTCTCGCTTTCACACCCCAACATATTGCAATACCTTTGCGGGTTTTACGACGAGGAGAAGAAAGAGTTCTCTCTTGTGATGGAGTTAATGAACAAGGATCTGTGGACTTACATGAAAGAGAATTGTGGTCCTAGGAGGCAGATTCTATTCTCTATCCCTGTTGTGGTGGATCTCATGCTTCAGATGGCCAGAGGAATGGAGTACCTGCATTCCCAAAACATTTGCCATGGACACCTTAACCCTTGTAATATTTACCTCAAGAAAATGAATTCCCAAGAGGATTATTTTCAGGCAAAGGTTGCAGGCTTTGCCTTGTCTTCTGTCAACAATGCTAGTACTAACGATACTGCCATCCAAGACTTTAACCCTTTAACCTGGTATGCTCCTGAAGTTTTGTCCCGGTTGGAACAAAAGAATGGTGGTGCTTCTTCTTCTAAGGAAGCCGATGCCTACAGCTTTGGGATGATATGCTTCCAGTTGTTGACAGGAAAAGTGCCTTTTGAAGATAACCACCTTCAAGGAGACAGAATTAGACAAAACATAAAGGTCGGCGAGAGACCTTTGTTTCCTTACCGTTCCCCGAAATACCTTGTGAATTTGATCAAGAAGTGCTGGCAAACTGACCCTGCTCAGCGTCCCAGCTTCTCGTCCATATGTAGGATTTTGCGGTACACCAAAAAGTTCCTTGCCATGAATTCAGAGTCCCAACTCATCAACCCTGAGCTCAACTTTCTTGAGGTTCCACCTGTGGATTTCTTTGAGATAGAGACAACGTTCCTAAAGAGCTCTTCAACCGAGAGGTCATCTTGTGTGTCCGCTGTGTCCCAGATACCCTATGAAATGTTTGCTTATAAGGTTGAGGAGAAAGCGAAAATGAATCCTAACAACAGTACTACCAAAGATGAGTGCTGCGAGCACCACCAAAAGGATGGGTGTAGGAGTGAAAGTGACGACCCAAGTGCAGAGTGCGATAGTGATAACGCCTCCATAGTGACAGATTCGCTCCCTCAAACAACCCATCCTACATCTATTTGCAGTGACGCACAGTTTGTTTCCTCTGAAGTCCCCTACAAGAAAACGGTTAGAATAAAGAACCAAACACATGTGAAGGCAAAGAATGAACAAGAAAAACAAATAATGCGGGCGACAAAATCATTTCGACCGTCTTTATCGAATCGAGTTTCAAGGACGAGAAAGGTGAATACATCATCATTTCCACCAAGCAATTTGAGTCCAAGTAGATCTTTGCTGGGGTCTCAATCGGATGGCAACTCCAAAGGGAATCGATCAGCGTCACCACCAGCATCACCATCACTACCCATTCCTTCAAGGAAAAAACACGATGGCAATTTGTCGGATACTAAGACAAGTGTAAGGTTGAAAAAAATGGATCAGTCAACATTACCTAGATATGGCAGCATGACAGATAGCTCAAGGATGAAGAAGTCACAAATGACGTCGAACCAATCTTTGAGCGTGGGAAGAATGAGACGTGCCAACACTGAGACCGATTTGAAGGGGCTCACGCGAACCAATCTACTGAGCACTCCAAGATTATCCACAAGGAGCAGAAAAGGTGGTAATGTCTCGGTTTCGGACAGCGGTTCAAGGATGACAACAGGTGGGTTTTCGCCGTGGGCATTGAGTCCCCAAAGCCCCCATTTAAGAACAAATAAAGCAACCTGTCATCTCTCTGACTACGAAAGCAGTTTTGTGAAGAAAAGAGGAAGCATGTCACCGTTCGCAACTTGTGGCCATGTCTCGGATTAA 2607 0.4699 MEQFRHIGEVVGSLKALMVLRDEIQINQRQCCLILDIFSLAMDTIAEEMRQNLKLEERNGKWKALESPLTELCRVFKEGEHYIKQCLDSKHWLGKAITLSHHRDCVEFHIHNLLCYFPAVIEAIEIAGEITGLDPEEKAKKKVILGRKYDVEWKDPELFQWRFGKQYLVPRGICKNLENAWREDRWRLIEAIKDKTAKEGGSAVFRESEHGLAVMLLKKLLNGSEIGPIALLVGSKDFQVRRRLGHRKDLKEIQWLGQSFAMRNFQGDREAHQTEVSSILSLSHPNILQYLCGFYDEEKKEFSLVMELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGMEYLHSQNICHGHLNPCNIYLKKMNSQEDYFQAKVAGFALSSVNNASTNDTAIQDFNPLTWYAPEVLSRLEQKNGGASSSKEADAYSFGMICFQLLTGKVPFEDNHLQGDRIRQNIKVGERPLFPYRSPKYLVNLIKKCWQTDPAQRPSFSSICRILRYTKKFLAMNSESQLINPELNFLEVPPVDFFEIETTFLKSSSTERSSCVSAVSQIPYEMFAYKVEEKAKMNPNNSTTKDECCEHHQKDGCRSESDDPSAECDSDNASIVTDSLPQTTHPTSICSDAQFVSSEVPYKKTVRIKNQTHVKAKNEQEKQIMRATKSFRPSLSNRVSRTRKVNTSSFPPSNLSPSRSLLGSQSDGNSKGNRSASPPASPSLPIPSRKKHDGNLSDTKTSVRLKKMDQSTLPRYGSMTDSSRMKKSQMTSNQSLSVGRMRRANTETDLKGLTRTNLLSTPRLSTRSRKGGNVSVSDSGSRMTTGGFSPWALSPQSPHLRTNKATCHLSDYESSFVKKRGSMSPFATCGHVSD* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0237 868 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 713 - -
Vra11g0237 868 MobiDBLite consensus disorder prediction 602 622 - -
Vra11g0237 868 MobiDBLite consensus disorder prediction 797 816 - -
Vra11g0237 868 MobiDBLite consensus disorder prediction 573 622 - -
Vra11g0237 868 PANTHER SERINE-THREONINE PROTEIN KINASE 1 713 - -
Vra11g0237 868 MobiDBLite consensus disorder prediction 725 739 - -
Vra11g0237 868 MobiDBLite consensus disorder prediction 579 599 - -
Vra11g0237 868 Gene3D Transferase(Phosphotransferase) domain 1 240 521 - -
Vra11g0237 868 MobiDBLite consensus disorder prediction 747 775 - -
Vra11g0237 868 MobiDBLite consensus disorder prediction 646 660 - -
Vra11g0237 868 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Vra11g0237 868 Pfam Protein tyrosine and serine/threonine kinase 268 500 IPR001245 GO:0004672|GO:0006468
Vra11g0237 868 SUPERFAMILY Protein kinase-like (PK-like) 262 524 IPR011009 -
Vra11g0237 868 ProSiteProfiles Protein kinase domain profile. 227 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra11g0237 868 MobiDBLite consensus disorder prediction 643 775 - -
Vra11g0237 868 MobiDBLite consensus disorder prediction 661 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0237 Vra-Chr11 1599872 1603760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0237 275 501 MAP Kinase Kinase Kinase AT5G58950 28.448 3.50e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Vra11g0237 PK_Tyr_Ser-Thr 2.1e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0237 - - vra:106776526 1727.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0237 11 1599872 1603760 Vra11g0237 11 1599872 1603760 ECH