Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0231 ATGGAAAGTGAAAAGAGTTGGGTGCAGAAAGCACTGGTGAGTGAGCTAATTCAGGGGTTGGAGATAGCAAGAAAGTTGAAGGAAGACTTCAATATACCCTCTTCCATTCACACCAGAGACTCACTACTGCAGAGTATACTGTCTTCTTACAACAAGGCCTTGCTTATTCTGAGACCGAATGCACCATTTTCAAACTCAGAAACCATGCATCAACCAACTCAAACTTCGTCACCACATGAAGGTGCCCTCAAGGATCATCAAGAACTTAAACAGAATGCAAAGAAAAGAAAGAAGATGCCCAAATGGAAGGAACAGGTTAGAGTGAAGATCCACAATGGGGTTGAAGAACCTCTGCAAGATGATTACAGCTGGAGAAAATATGGACAGAAAAACATCCTCAATGCAAAATATCCCAGAAGCTACTACAGGTGCACATTCCAAAAATCTAAGGGCTGTTTCGCCACGAAACAAGTGCAGAGATCAGAAGAAGACCCCAATGTCTTTGACATAAGTTACCGAGGAAACCACGTCTGTTCTCAGGGAAAAGATGTCGTTCTGTCATTAAAGTTAGCAGATACAGAAGAGAAATCTCAAGGTTGTGACAGTGACATTCAGTTTCATCATGCACAGTCATCGCGAGAAAGAGTTACAAACTACACAAACACGTTGATTGCCGAAACGGATAACATGACCCAACATCCATTCCCTTCATTTGAATGCATGACACATGATAACCACCACACGTTTCTTCCTTCCTTTGTACTGGAGAATGATCCCTTTTGCAGCACCATTTCCCAAACATCCTTCTTCTCTCCGAACTCACCTGAATCAAATTATCTTGTGTCTCCGTCTTTTCATTTACATGATGAATTCGATAGGGTCTTTGACAAGCCGTGCCCTGATTCTGATGCTGTCGGGATAGTTTTAGCTGATGCACCAACCACCAATTCTCCAATTTTTGACTTCAATTTCTCACTCGATACAGCGGGAATCGGTGGAGATTGCCCTTCAATGCCTTGGGGTTTTCATCCTAAGTGCCCTTGA 1044 0.4282 MESEKSWVQKALVSELIQGLEIARKLKEDFNIPSSIHTRDSLLQSILSSYNKALLILRPNAPFSNSETMHQPTQTSSPHEGALKDHQELKQNAKKRKKMPKWKEQVRVKIHNGVEEPLQDDYSWRKYGQKNILNAKYPRSYYRCTFQKSKGCFATKQVQRSEEDPNVFDISYRGNHVCSQGKDVVLSLKLADTEEKSQGCDSDIQFHHAQSSRERVTNYTNTLIAETDNMTQHPFPSFECMTHDNHHTFLPSFVLENDPFCSTISQTSFFSPNSPESNYLVSPSFHLHDEFDRVFDKPCPDSDAVGIVLADAPTTNSPIFDFNFSLDTAGIGGDCPSMPWGFHPKCP* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0231 347 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 331 - -
Vra11g0231 347 MobiDBLite consensus disorder prediction 63 83 - -
Vra11g0231 347 SMART WRKY_cls 118 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra11g0231 347 Pfam WRKY DNA -binding domain 119 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vra11g0231 347 MobiDBLite consensus disorder prediction 63 80 - -
Vra11g0231 347 SUPERFAMILY WRKY DNA-binding domain 117 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra11g0231 347 Gene3D WRKY domain 103 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vra11g0231 347 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 331 IPR044810 GO:0003700
Vra11g0231 347 ProSiteProfiles WRKY domain profile. 113 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0231 Vra-Chr11 1555970 1557541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0231 6 181 WRKY Transcription Factor Family AT4G11070 38.889 6.20e-41 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vra11g0231 WRKY 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0231 - - vun:114174666 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0231 11 1555970 1557541 Vra11g0231 11 1555970 1557541 ECH
Vra11g0231 11 1555970 1557541 Vra7g3400 7 53352679 53354797 PCT