Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0212 ATGAGCGCCACCACCCCAGCCCTCTCCACCGTCACTGACGCCAAGTTTCATTCTCGTTTTAAGCCATTATCTCGTTTTCCTTCTTCTCTTCATTTTCGCACTCTTCACTCCCAACAATTTTCTTCAATCAGATGCCAATCGATTAATACCGATAAGAAGAAACCAAGTAGAAATATCCTTGACAATGCAAGTAACCTCCTCACAGACTTTTTAAGTGGTGGAAGTATAGGGTCTATGCCCATAGCTGAAGGGGCAGTAACAGATCTGTTTGATCGACCTCTCTTTTTCTCACTATATGATTGGTTCTTGGAGCACGGCGGAGTGTACAAACTTGCCTTTGGACCAAAATCATTTGTTGTTGTATCAGATCCCATAGTTGCTAGACATATTCTGCGAGAAAATGCATTTTCTTATGACAAGGGAGTACTCGCTGATATCCTAGAACCAATAATGGGCAAAGGACTCATACCAGCAGACCTTGATACTTGGAAGCAAAGGAGAAGAGTCATTGCTCCGGCTTTCCATAACTCCTACTTGGAAGCTATGGTCAAAATATTCACAGCTTGTTCAGAAAGAACAATATTGAAGGTTAATAAGCTTCTCGAAGGAGACAGTTATGGTGGACCTAAGTCAGCTGAATTGGATCTTGAGGCAGAGTTTTCTAGTTTGGCTCTTGATATTATTGGTCTTGGTGTGTTCAACTATGATTTTGGTTCTGTCACCAAAGAATCTCCTGTTATTAAGGCAGTCTACGGAACTCTTTTTGAAGCTGAACACAGATCCACTTTCTACATTCCATATTGGAAAATTCCATTGGCAAGGTGGATAGTCCCAAGGCAAAGAAAGTTTCATCATGACCTAAAGATCATCAATACATGTCTAGACGAACTTATTAAAAATGCAAAAGAAAGCCGACAGGAGACAGATGTTGAGAAATTGCAGCAGAGAGATTACTTAAATTTGAAGGATGCAAGTCTTTTGCGTTTCTTGGTTGATATGCGAGGAGCTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTGTGGCTGGTCATGAAACAACGGCTGCAGTTCTTACGTGGGCAGTTTTCCTCCTAGCTCAAAATCCTAGCAAAATGAACAAGGCTCAAGCAGAGGTAGATTTGGTGCTGGGTACAGAGAGGCCAACTTATGAATCACTTAAAAAACTGCAGTATATTAGATTGATTATTGTGGAGGCTCTCCGTTTATATCCACAACCACCTTTGCTAATAAGACGAACACTCAAATCTGACGTTTTACCAGGAGGGTACAAAGGTGATAAAGATGGTTATGCAATTCCTGCCGGGACCGATCTCTTCATTTCTGTATATAATCTCCACAGATCTCCATATTTTTGGGATCGCCCTCATGAGTTCGAACCCGAGAGATTTCTTGTGCAAAACAAGAATGAAGAAATTGAAGGATGGTCCGGTTTTGATCCATCTCGAAGTCCTGGAGCCTTGTATCCGAACGAGATTATATCGGATTTTGCCTTCTTGCCTTTTGGTGGCGGACCACGAAAATGTGTCGGAGACCAATTTGCTTTGATGGAATCCACTGTAGCGTTGACTATGCTGCTCCAGAATTTTGACGTGGAACTGAAGGGGACCCCTGAATCGGTGGAACTAGTTACTGGGGCAACCATCCATACCAAAAACGGACTCTGGTGCAAATTGAAGAAGAGATCTAATTTACATTGA 1731 0.42 MSATTPALSTVTDAKFHSRFKPLSRFPSSLHFRTLHSQQFSSIRCQSINTDKKKPSRNILDNASNLLTDFLSGGSIGSMPIAEGAVTDLFDRPLFFSLYDWFLEHGGVYKLAFGPKSFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPAFHNSYLEAMVKIFTACSERTILKVNKLLEGDSYGGPKSAELDLEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFHHDLKIINTCLDELIKNAKESRQETDVEKLQQRDYLNLKDASLLRFLVDMRGADVDDRQLRDDLMTMLVAGHETTAAVLTWAVFLLAQNPSKMNKAQAEVDLVLGTERPTYESLKKLQYIRLIIVEALRLYPQPPLLIRRTLKSDVLPGGYKGDKDGYAIPAGTDLFISVYNLHRSPYFWDRPHEFEPERFLVQNKNEEIEGWSGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGLWCKLKKRSNLH* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0212 576 SUPERFAMILY Cytochrome P450 91 572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 74 572 - -
Vra11g0212 576 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PRINTS E-class P450 group I signature 509 519 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PRINTS E-class P450 group I signature 519 542 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PANTHER CYTOCHROME P450 FAMILY 4 74 572 - -
Vra11g0212 576 Gene3D Cytochrome P450 78 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 Pfam Cytochrome P450 102 565 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PRINTS P450 superfamily signature 405 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PRINTS P450 superfamily signature 510 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 PRINTS P450 superfamily signature 519 530 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0212 576 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 512 521 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0212 Vra-Chr11 1384205 1394648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0212 42 573 Cytochrome P450 AT4G15110 79.737 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0212 K24543 - gmx:606504 1035.79