Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0150 ATGTTAAGTCTAGCTCCTTCAGTTGATACCAATACTACCAAAGAGGTGCCTGCAGCAAAAACAGAGCAGAACCAAATTCCTCAGACTACCCATGTATTCAGATCAAAATTACCAGACATACCAATCTCCAACCACATGCCTCTCCATGCTTACTGCTTCGAAAACCTCTCCAAATTCGCTGACCGTCCTTGCCTCATCGTCGGCTCCGCCGCCAAAACCTACACTTACGCAGAGACTCACCTTATATCACGCAAGATTGCAGCCGGATTCTCGAACCTCGGCATCCGAAAGGGCGACGTCGTCATGATCCTCCTCCAGAACTCCGCCGAGTTCGTCCTCTCCTTCCTCGCCGCCTCCATGATCGGGGCCGTTGCCACCACCGCCAACCCGTTCTACACCGCCGCCGAGATCTTCAAGCAGTTCAGCGCCTCCAAGGCGAAGCTGATCATAACTCAGGCAATGTACGTGGACAAGCTCCGCAACCACGACGGCGGACTGAGCCTCGGCGAGGACTTCAAGGTCGTGACCGTTGACGATCCGCCGGAGAATTGCCTCCACTTCTCGGTGCTCTCGGAGGCGAACGAGAGCGACGTTCCGGAGGTGGAGATCCATCCGGACGACGCGGTGGCACTTCCGTTCTCCTCCGGCACCACGGGGTTACCGAAAGGAGTGATTCTGACTCACAAGAGTTTAACCACGAGCGTGGCGCAACAGGTGGACGGGGAGAACCCTAACCTCTACCTCACCACCGAGGACGTACTCCTCTGCGTGCTCCCGCTCTTTCACATATTCTCGCTCAACAGTGTGCTGTTATGCGCGCTGAGAGCCGGGAGTGGCGTTTTGCTGATGCAGAAGTTCGAGATTGGAACGCTGCTGGAGCTCATACAGCGCTACCGCGTGTCGGTGGCGATGGTGGTGCCTCCCTTGGTGCTGGCGCTGGCAAAGAATCCGATGGTCGCGAATTTTGACCTCAGTTCAATACGGTTAGTTCTCTCCGGTGCCGCTCCCTTGGGTAAGGAGCTCGAAGAGGCCCTCCACAGCAGGGTGCCTCACGCTGTTTTGGGACAGGGTTACGGGATGACAGAAGCAGGACCGGTCCTTTCCATGTGCTTGGGCTTTGCAAAACAACCATTCCCAACAAAATCTGGATCTTGTGGAACCGTTGTCAGAAATGCAGAACTAAAGGTAGTTGACCCTGAAACTGGTCGTTCTCTTGGCTACAATCAACCCGGTGAAATTTGCATCCGAGGGCTACAAATCATGAAAGGATATCTGAACGACGACCAAGCGACGGCATCCACCATCGACGCAGAGGGTTGGCTTCACACCGGTGATGTTGGCTACGTAGATGATGACGATGAAATTTTCATTGTTGACAGAGTGAAAGAACTCATTAAGTTTAAAGGCTTCCAGGTGCCTCCTGCAGAACTTGAAGGGCTTCTTGTAAGCCATCCCTCCATTGCAGACGCTGCAGTTGTTCCACAAAAGGATGTTGTTGCCGGCGAACTTCCCGTCGCTTTCGTTGTGAGATCTAACGGCTTTGATCTAACGGAAGAGGCTGTGAAAGAGTTTATAGCCAAACAGGTGGTGTTTTACAAAAGACTGCACAAAGTTTATTTTGTTCATGCTATTCCCAAGTCTCCATCGGGAAAGATACTAAGGAAAGACCTGAGAGCAAAGCTAGAAGCCGCCGCCGCCGCCGACGTCACTCCGACGCCTTAA 1722 0.5325 MLSLAPSVDTNTTKEVPAAKTEQNQIPQTTHVFRSKLPDIPISNHMPLHAYCFENLSKFADRPCLIVGSAAKTYTYAETHLISRKIAAGFSNLGIRKGDVVMILLQNSAEFVLSFLAASMIGAVATTANPFYTAAEIFKQFSASKAKLIITQAMYVDKLRNHDGGLSLGEDFKVVTVDDPPENCLHFSVLSEANESDVPEVEIHPDDAVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSGVLLMQKFEIGTLLELIQRYRVSVAMVVPPLVLALAKNPMVANFDLSSIRLVLSGAAPLGKELEEALHSRVPHAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGRSLGYNQPGEICIRGLQIMKGYLNDDQATASTIDAEGWLHTGDVGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDVVAGELPVAFVVRSNGFDLTEEAVKEFIAKQVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEAAAAADVTPTP* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0150 573 PANTHER 4-COUMARATE--COA LIGASE 3 31 560 - -
Vra11g0150 573 MobiDBLite consensus disorder prediction 1 25 - -
Vra11g0150 573 Gene3D - 23 461 IPR042099 -
Vra11g0150 573 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 560 - -
Vra11g0150 573 Pfam AMP-binding enzyme 54 467 IPR000873 -
Vra11g0150 573 Gene3D - 462 566 IPR045851 -
Vra11g0150 573 ProSitePatterns Putative AMP-binding domain signature. 211 222 IPR020845 -
Vra11g0150 573 SUPERFAMILY Acetyl-CoA synthetase-like 40 563 - -
Vra11g0150 573 Pfam AMP-binding enzyme C-terminal domain 476 551 IPR025110 -
Vra11g0150 573 CDD 4CL 42 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0150 Vra-Chr11 987937 991883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0150 27 474 Monolignol Biosynthesis Gene Families AT1G65060 71.619 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0150 K01904 - gmx:547492 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0150 11 987937 991883 Vra11g0150 11 987937 991883 ECH