Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0139 ATGGGGGGTGGAGGAGATGCAACTGGGGTGATGAGAGGTCCCAATGAAGAAGATGATGCTGTTGGAAAGAATGAAGATGAAAAGTGGCCACCTTGGCTTAGGCCACTTCTCCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACGCAGATTCCCACAAAACTGAGTGTAACATGTATTGTTTGGACTGTAACAATGGAGCCCTTTGCTCTGTCTGTCTTGCTTCTCACAGAGAACATAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCAGAGATTCAAAAATTTGTGGACATAACAGGTGTTCAAAATTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAGCCTAGGCCTAGCAAAGGAGTCACCAACACCTGCAAAGTATGTGAGCGCAGCCTTCTTGATTCATTCAGCTTCTGTTCTCTTGGTTGTAAGATGGTTGGAACCTCCAAGAAGTTCCGGAAGAAGAAAATGTTAGCTGAGACAGATGGGTCTGATGGCGAAGAATCAATCAATGGCATGAGCAATGAAAGTGTAAGAATCAAAATCCTGAGCTTCACAGCATCAACACCACCACCAACGGTGGTAAATCACAGAACTGCTAAGAGGAGAAAGGGTGTCCCACATAGATCTCCAATGGGGGGTACCCTTATCATAAAATACTACTAA 699 0.4335 MGGGGDATGVMRGPNEEDDAVGKNEDEKWPPWLRPLLQTSFFVQCKVHADSHKTECNMYCLDCNNGALCSVCLASHREHRAIQIRRSSYHDVIRVSEIQKFVDITGVQNYIINSAKIVFLNERPQPRPSKGVTNTCKVCERSLLDSFSFCSLGCKMVGTSKKFRKKKMLAETDGSDGEESINGMSNESVRIKILSFTASTPPPTVVNHRTAKRRKGVPHRSPMGGTLIIKYY* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0139 232 MobiDBLite consensus disorder prediction 1 25 - -
Vra11g0139 232 CDD Bbox2 45 84 - -
Vra11g0139 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 16 226 - -
Vra11g0139 232 Pfam PLATZ transcription factor 85 156 IPR006734 -
Vra11g0139 232 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 16 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0139 Vra-Chr11 901399 903883 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Vra11g0139 PLATZ 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0139 - - vun:114172978 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0174 2 1337762 1339959 Vra11g0139 11 901399 903883 ECH
Vra11g0139 11 901399 903883 Vra11g0139 11 901399 903883 ECH