Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0137 ATGACTCAGAACACTGATATGAGACTTGAATCGGGAACTTGCAATGTGTGCTCGGCTCCTTGTTCATCTTGCATGCATCTTAATCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCATAGGAGCGGCTGTTGATCAGTATTCTATGGATGAGGATAATGCATATTCTCCTAGGAGCAGAGCTTGTGAAAGCTCACAACAAACTGTCAGCGAAGCAAGTAATATGCAGAGTGTTAATTCAAGTCAAGATGCTCTGTCTGAAAATGCCAAGAGTAGACAGATCATACTGAATAAGTATCAGGATTCCAAACATTTAGAAGGTCACGATGACAACACTTCTTGTATTAGTAGATCCAGTGATGCTAATTTAGTGAATGTTAGCCATCAAAGGAATGAAGAACGAATAACAATGCATGAGGAGAGGGGTTCATGTTCTCTTGTGTCAGAAAAATTTTCTGAATGCACCATTGAGAATTTTAGTTCTTCATGTACCAAGGAAAGAGAACCTGTTGTTTCTGGTGAGAAATGTACTACGGTTAAGGATGGTCTTATTGAGAGTACTTCCAACGTTTTACTAAAGGTATGCCCAAAGTTAGAGGCAGACACTGACGTCTGTGAAGCTAACAATGAAGATCCTAAATGTTCAGTTCAAGATGGACAGTGTGAGAAAGCTGCAGAGCTGGTTAAATCGCCTGCGAAGCGGGAAACTCAATCTGAAGATGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAGGTGTGCGACATCTGTGGAGATGCTGGTCGGGAGGATCTACTTGCTATATGTAGTAGGTGCAGTGATGGTGCAGAGCACACCTACTGTATGCGAGAAATGCTTGAGAAAGTTCCTGAAGGGGATTGGTTGTGTGAAGAATGCAAAGACGCAGAAGAGAATGAAAATAAAAAACCGGATGTTGAAGACAAAAAAATTGTTGAAGTTAGTTCAACTTCACAAGTTACTTGCAAAAGACTTTCTGATAACATTGACGTAGCTCCAGCAGCAAAAAGACAAGCTCTTGAATCAAGCACAGGATCGCCAAAGACATCAAGCCCCAAGAGATTAGTTCCACTGTCCCGAGAATCTTCATTTAAGAGCTTAAATAAATCTAAAGTGAAGCCTGGTCTTCTGATACCTAGTCGAAACAACTCTGGTGGTAGTGACTTAGAGATTGCTCGCTCTCCTTCCACTGGTCCCAGGGGTCAAACTTCAAAGGGTATGTTAATGAAATCTAATTCATTCAGCAATGTAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCTCCAAACCAAAAGGGGTTAATGAACATGCTTCAAAGAACACGGAGATGCCTGCTCGAACCACAGGCAAATCAACATTATTCAAATCTCCAAGTTTGGGGAGAACAAATCCAACCGAATCAAAAGTTAAAATGCTTTCACCCAAGTCTGCAGCTGTGCAGGATTTGAAAGGATCTAGGCATTTAAAAGAATCAGGTGCAATTGATAGGAAATTTCCATCTAGGATTGATCGGCCTGCAGTTAGTTCTGTTGTTTCCACTGCTAAGGGTGATCAAAGGCTCACACCTCGTGCTGAATCCAGTAAACCTTCAACAATGAACAACAATCGAGAGTTAAAGGCTAATCAGGATGGAAAAGCAAATGCATTATCAAGGTCAATGAGCAATATTAACCGGAAAAGTCTGGAGCCTCAAATTATTTCAGAGAGAACATCAATCCGTATTGATGAAGCTCAACAGGATGTGCTGCCTCGAGCACGGGAGACAGCTAATCAGATTGAGAAAAGCAGAGATAGTTCTAGTGATCGCGTAAGGCCAGCAGTTCCTACTTCAAAGCCCCCATTCTGTCAAAAATGTAAGGAATTTGGCCATGCTATGGAATGTTGCAGTGTTGGCACTACACAAGAATCTGGTGCTGAAATATCTGTAACTACGTCGAGTAGTTCAAAAGAGGAAATGCATAAAGGCAATATATTGAAAGCTGCAATTCAGGCTGCACTACTGAGAAGGCCTGAAATTTACAAGAAGAAAGAAGTATCTAACCAAACTGATGAGGTTTCTACCTCAGGCACAGATTTAAATTGTGAAGTGACTTCAAATGACCCAGTGTTGGTTTCCAGCACACTGAAGAATAGTATATCTGCTGAAGAAACCCCTGAACAACAGGAAATCCTTGAGAACTCTACCTCAGATTCTTCCAAATCTTCTTCTGCCAATGATTTTAAGCAACTAAAGTCTTGTCCGACTGATTCTCGATCCCAACCAGGAAAGTCAGCTTCTAATTGTCTTGCAGCTGGAAAAACTGTAGTGAAAGACATGTCTGATAAAGCCGTGACATTGTCGATTGTTCCTTCAAAGACGTTGGCCTTTCCTGAATACGAATACATATGGCAGGGTGCCTTTGAAGTGCATAGAAATGGAAAGCCTCCTGATTTATATACTGGACTTCAGGCGCATTTATCTTCTTGTGCTTCTCCTAAGGTTCTTGGAGCAGTGAACAAATTTCTTCCTAGAGTTTCTTTCAATGAAGCTTCTCGCTTGAGCATGTGGCCTTCGCAATTTGATCATGGTGGTGTTACTGAAGATAATATAGCTCTATACTTCTTTGCCAGTGATGTTGAAAGTTACGAGAGACACTACAAAGGTCTTTTGGATCGCATGATTAGAAATGATTTAGCACTTAAGGGAAACTTTGAGGATGTTGAACTGCTGATATTCCCTTCCAATCAGCTTCCTGAAAATTCACAGCGCTGGAATATGTTGTTTTTTTTATGGGGCATATTTAGGGGGAGGAAGATGAATCATTCTGATTCTACAAAAAAGGTTTGTATTCCCAGTTTGAACGTAATGCCAGCCGAGGAGAAATCTTCAACTGTTGTTTTGACTGTGCCTGAGATACATTGTTTGGCCAAGTGCAAGGATGAAGAAACAATGGGTCGGCATAGATCATGCAATGCACTTGTCCCCTCCACATCCACAGACCAACATCCAACTACTGGATGTAGGAATATCGATGTCAATGACCAGACTCATTTGGATCTACAAGTAAATACAGAGAAGCTAGATGGTAGGATTGAATCAAAGTGGCTTCCAACTACCACGACTCTGTTATGTCAAGAGACGATCTCCACTGATTCGTCCTCGAAAGCTAGCGTGCCTGAACAGGGACCATGCAAAGAGTCTAAAGCTCCCGAAGCCATGGGAAAAAGTGCAAGCAGGAGTGTTATGGAAACAAAAATTGATTCTGATATTTCTGTCAAAGAAGAGAAAACGTTGTCTGTGATTCCTTCTGAAAAAGGTGCTGCAAGCAATATTACTAAGGATAAAATTTCTGAGAAAATAAACAGTGATGAAGACCATCAAAGGCCTAAGGAGAAACAAAAAGAGTATCGTCACTACAGTATTGATTTGGAGGCAAATATTGACAATGAAGAAACAGGTGATGCAAGCGATTTGAGTAAGGAGAAAAACTCAATAACAATTATTGGTAATGAAGATCAGAAAGGGCCTATGAGGAAACAGAAAGATAATCGTTATATTGACTTAGAGGTAGCACTTGAAGATGAAGAAACAGATCTTGTAAGCAATATACGCGGGGATAAAATTTTAGAAAAAATGGATGTTGAGGAAGATTGGCGATGGTCTAAGAGGAAACGAAAAGATGATCACTATATCGACTTGGAGGCAACTTTTCAGGGCGACCCAAGCGCAGAAGAGATAAATTGTCAGCTACCTAATGATAAAGTTAAACATATAGATCTTTCTGACACAATTATGCAGGGTTCTGCTGTCAGTTGTCAGAAAATGCCTTGGAGTCAGGGAAATGTCAAGTTAGAAGACACAGAAAGTTCTGGCAAGAAGCTTAAGACTGGTTTCGGTGGGATCTATGGTTCTGGAGGTAGAGACTCTTTTAATGACAGTTTTACATCTCTTGGAAATGATCTTGGTTCCTGTTCTTCAGTTGAGGACAAAGGATGCGAGGAAGCTTGTGATGAGAAAATTATCAGGGAGGACTTGGGAACGATGGAAAGAACCTTCTTCCCAGTGGGCAAACACAATATTAGCAACTCACTGTCTGTGCTGAATAGCTTGTCAACCAAAGGGGTTGGTGAATATGATAAAGGATTTCAGGATGTGATTCCTAATCTAGAGCTTGCCTTAGGGGGCAAATCGAAAGCACTGCCGGCACCAGCTGCGCCCAAGGGTATGTTGCCTTTCTTAGTCGGGCCAGTAGACAGGCAAAATAACCGCCCAGATAGCTTGGGAGATGGGCAGGAGGATGATGGTGTTGCTGCATCTCTTTCCCTCTCTCTGTCCTTTCCATCTCCAAACAAGGAACACAAAAAACCTGCAGAGCTTTTACCTGATGGCCAGCGTATGGACAACTCGTTTTTCCTTTTTGGGAGAAAATAA 4461 0.4145 MTQNTDMRLESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRIGAAVDQYSMDEDNAYSPRSRACESSQQTVSEASNMQSVNSSQDALSENAKSRQIILNKYQDSKHLEGHDDNTSCISRSSDANLVNVSHQRNEERITMHEERGSCSLVSEKFSECTIENFSSSCTKEREPVVSGEKCTTVKDGLIESTSNVLLKVCPKLEADTDVCEANNEDPKCSVQDGQCEKAAELVKSPAKRETQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEENENKKPDVEDKKIVEVSSTSQVTCKRLSDNIDVAPAAKRQALESSTGSPKTSSPKRLVPLSRESSFKSLNKSKVKPGLLIPSRNNSGGSDLEIARSPSTGPRGQTSKGMLMKSNSFSNVNSKPRVKLVDEVVPSKPKGVNEHASKNTEMPARTTGKSTLFKSPSLGRTNPTESKVKMLSPKSAAVQDLKGSRHLKESGAIDRKFPSRIDRPAVSSVVSTAKGDQRLTPRAESSKPSTMNNNRELKANQDGKANALSRSMSNINRKSLEPQIISERTSIRIDEAQQDVLPRARETANQIEKSRDSSSDRVRPAVPTSKPPFCQKCKEFGHAMECCSVGTTQESGAEISVTTSSSSKEEMHKGNILKAAIQAALLRRPEIYKKKEVSNQTDEVSTSGTDLNCEVTSNDPVLVSSTLKNSISAEETPEQQEILENSTSDSSKSSSANDFKQLKSCPTDSRSQPGKSASNCLAAGKTVVKDMSDKAVTLSIVPSKTLAFPEYEYIWQGAFEVHRNGKPPDLYTGLQAHLSSCASPKVLGAVNKFLPRVSFNEASRLSMWPSQFDHGGVTEDNIALYFFASDVESYERHYKGLLDRMIRNDLALKGNFEDVELLIFPSNQLPENSQRWNMLFFLWGIFRGRKMNHSDSTKKVCIPSLNVMPAEEKSSTVVLTVPEIHCLAKCKDEETMGRHRSCNALVPSTSTDQHPTTGCRNIDVNDQTHLDLQVNTEKLDGRIESKWLPTTTTLLCQETISTDSSSKASVPEQGPCKESKAPEAMGKSASRSVMETKIDSDISVKEEKTLSVIPSEKGAASNITKDKISEKINSDEDHQRPKEKQKEYRHYSIDLEANIDNEETGDASDLSKEKNSITIIGNEDQKGPMRKQKDNRYIDLEVALEDEETDLVSNIRGDKILEKMDVEEDWRWSKRKRKDDHYIDLEATFQGDPSAEEINCQLPNDKVKHIDLSDTIMQGSAVSCQKMPWSQGNVKLEDTESSGKKLKTGFGGIYGSGGRDSFNDSFTSLGNDLGSCSSVEDKGCEEACDEKIIREDLGTMERTFFPVGKHNISNSLSVLNSLSTKGVGEYDKGFQDVIPNLELALGGKSKALPAPAAPKGMLPFLVGPVDRQNNRPDSLGDGQEDDGVAASLSLSLSFPSPNKEHKKPAELLPDGQRMDNSFFLFGRK* 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0137 1486 MobiDBLite consensus disorder prediction 694 714 - -
Vra11g0137 1486 PANTHER - 7 1480 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 352 382 - -
Vra11g0137 1486 ProSiteProfiles Zinc finger PHD-type profile. 258 309 IPR019787 -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 393 428 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 446 485 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 457 485 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 528 563 - -
Vra11g0137 1486 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 334 IPR013083 -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 728 776 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 1059 1092 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 602 626 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 1114 1146 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 1421 1474 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 523 563 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 699 714 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 349 428 - -
Vra11g0137 1486 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 7 1480 - -
Vra11g0137 1486 SUPERFAMILY FYVE/PHD zinc finger 247 309 IPR011011 -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 602 618 - -
Vra11g0137 1486 SMART PHD_3 260 307 IPR001965 -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 233 252 - -
Vra11g0137 1486 MobiDBLite consensus disorder prediction 1126 1146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0137 Vra-Chr11 888081 897105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0137 - - vun:114172977 2696.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g0168 2 1297362 1306562 Vra11g0137 11 888081 897105 ECH
Vra11g0137 11 888081 897105 Vra11g0137 11 888081 897105 ECH