Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0105 ATGGATTTTGTAAGCAGTGCCCTGCTCGTGCTGTTAGCATGGACCTCCATTCATGCTACATTTTCATTCCTAAGAAGATTCAGAAAACCACACCACAAACTTCCTCCTGGACCCTATCCTCTTCCCATCATAGGAAACCTTCTTCAACTGGGTAACAAGCCCCACCAATCATTGGCCAAGCTTTCCAGCATACATGGCCCTCTGATGAGTCTAAAGCTGGGCCAAATAACCACCGTTGTGGTGTCTTCAGCTGAGATGGCCAAAGAGGTGCTCGTAACCGACGACCACCTTCTGTCAAACCGAACCATTCCCCAATCTGTCTGTGTTCTGAACCACGAAAACTATAGCCTTGCCTTCATTCCCGTTTCCCCTCTTTGGCGCGACTTGAGGAAAATATGCAATGGCCAGTTGTTTGCACGCAACTCTCTCGATGCTAGCCAAGATGTTAGGCGTAGCAAAGTGCAACAACTCCTATCCGAAATCCACCGATGCTGCGAAAGCGGTGAAGCAGTGGATATTGGAACAGCAATCTTCAAGACCACCATCAATTTATTATCAAACACCATTTTCTCCGTGGATTTGGCTCAATCTTCTGACAAAGCCGGAGAGTTCAAAGAACTGATCACCAATATCACCAAACTGGTTGGAATACCAAACCTGGCCGATCATTTTCCTGTCTTGAAGATGGTTGATCCACAAGGCATAAAAAAACGTCAGGCTAAGAATGTGAAGAAGGTGTTGGACATCTTTTCCCACTTGGTTGACCAAAGGTTGAAGCAAAGAGAAGGTACACACGTTGACGTGCAGAACGACATGTTAGACTCTCTTCTCAACATCTCTGGGGAGAAGAAGATGATGGACAAAACAATGATTCAACATTTGTCACATGATTTGTTTGTTGGGGGAACTGATACGACGACGTCTACAGTGGAATGGGCGATGAGTGAGTTAGTACGCAATCCAAAGATTATGTCAAAGGCAACAGAAGAGTTGGAGTTAAGCATTGGTAGAGGTAACCCAGTGAAAGAATCAGACATTGGAAGACTTCCGTACTTGGAAGCTATAATAAGAGAGACACTTCGGTTGCATCCACCAGTTCCATTTTTACTGCCTCGAAAAGCTGAGACAGATGTAAACGTATGTGGGTACACTATCCCAAAGGATGCAAAGGTACTGGTGAATGTATGGACTATTGGAAGGGATTCGAGCATTTGGGAGAATCCAAATTCGTTTTGTCCAGAGAGATTTCTGGGGTCAGACATTGATGTTAAAGGGAGGAATTTTGAACTGACACCCTTTGGGGGTGGGAGGCGAATATGCCCTGGCATTTTGTTGGCTACGAGGATGATGTTCCTAATGTTGGGTTCCTTAATTAACTCCTTTCACTGGAAACTTGAAGATGGCTTCCAACCCCAAGATATGAACATGGAGGAGAAATTTGGGATCACCTTACAGAAGGCTCGACCATTACGACTTGTTCCTGTCAAAAAATAA 1494 0.4485 MDFVSSALLVLLAWTSIHATFSFLRRFRKPHHKLPPGPYPLPIIGNLLQLGNKPHQSLAKLSSIHGPLMSLKLGQITTVVVSSAEMAKEVLVTDDHLLSNRTIPQSVCVLNHENYSLAFIPVSPLWRDLRKICNGQLFARNSLDASQDVRRSKVQQLLSEIHRCCESGEAVDIGTAIFKTTINLLSNTIFSVDLAQSSDKAGEFKELITNITKLVGIPNLADHFPVLKMVDPQGIKKRQAKNVKKVLDIFSHLVDQRLKQREGTHVDVQNDMLDSLLNISGEKKMMDKTMIQHLSHDLFVGGTDTTTSTVEWAMSELVRNPKIMSKATEELELSIGRGNPVKESDIGRLPYLEAIIRETLRLHPPVPFLLPRKAETDVNVCGYTIPKDAKVLVNVWTIGRDSSIWENPNSFCPERFLGSDIDVKGRNFELTPFGGGRRICPGILLATRMMFLMLGSLINSFHWKLEDGFQPQDMNMEEKFGITLQKARPLRLVPVKK* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0105 497 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 496 - -
Vra11g0105 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Vra11g0105 497 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 Gene3D Cytochrome P450 24 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra11g0105 497 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0105 Vra-Chr11 721863 723790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0105 1 497 Cytochrome P450 AT2G45550 46.351 2.32e-158 458
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0105 - K23810 gmx:100805772 707.597