Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0067 ATGTTGCAGTGTGACTTATTCTTCACCCATTTTTGGAGTTTCCATGCACTTCACTTCCTTTCTCTACAGAACACTACTTCTCACTCTCTATATCACCACATCCATTTCTCTTTTCTTCTTCGACCTCGCAAACAAGAGGGCATGGCGAACACGTCATTATCATCAGTAGCAGCGATAGTAGCATTGTTGGTTTCATGTGGAATATTAATTCAGGAGTGCGAGGGCCAGGGCCAGCAAGCCAAGGCTTTGCCTCCAGCAGGGGAAACTTGTAACGGGATTTTCATTTCCTATGACTTTCTCAAACGAACAAAAGAATACCCTCACGTGAAGAATGTGACGGCGCAGTCCTGGGCCTTCAGTTCCACCGCATCAGTTCTCAACACAGGTAAAGAAGTATTTAAGGCGTGGAAGTTGTTCATAGAGTTTCAACATGACGAGATTCTTGTCTCCGTCAGCGGAGGCAATATAGAAGAAGCAACTGAGTTCCCCGCTTCGGTAGGAAATGGCACTACCTTTGTCGGAGCTTCTCAGCCAGACTTGGATAGCGCAATCAACACAGCTCAAGATTTAACCCAGATCCAAGCCGTCATCGACCTTACCGGTACCCAGTTTGGAGTAAAGCCCCCTACGGTTCCTATGCCAAAAACCATCAAGTTGGTAAATGACGGTTACAAATGCCCCAAACCAACCACCCACAAGAGTTCAATGTACGCGTGCTGCAAAAAGGACCCTAAAGCCAAGATTTCAGTTGCTAAGAAGACAAAATTCTTGGGACGGCAAAAAGGGGATCTTCTGATATCCTATGACGTTACTCAAGTGTATGACGATAATTATTTTGTTCAGGTGACGATGGATAACGAACACTTTTTGGGACGGTTGGATAATTGGAACTTGACGTGGGAGTGGACAAGAGGGGAATTTATATACTCCATGAAAGGTGCTTTCACACGTGAGATAGAGTCCCTAAGTTGCATCAATGGTGAGGCAGGAAAGTATTACGCGGGCTTGGATTTCTCTAAAGTGCTTAATTGTCAGAAGAATCCTATAGTGAGTGATTTGCCTTCAGAGAAATATAACGACAGTGAACTTGGAAAGATACCTAACTGTTGCAGAGATGGAAATCTTTTACCCATCCTTATGGACCCTAGCAAATCCAAGTCTGCTTTTACAATGCAAGTCTACAAAATTCCACCTGATTTAAACAAAACGGCAATTTACCCTCCTGAGAAATGGCAAATAACGGGCATTCTGAATCCACACTACAAATGTGGGTTACCCAGAAGAGTGGAGCCTGTTCGATTTCCAGACACCAGGGGACTCAAAGCAGAGGTTATTGCCATTTCAAGCTGGCAAATAGTCTGCAATATCACTAAGCCAACCAGAAGGAACACTCGCTGTTGTGTTTCTTTCTCCTCTTATTACAATGACTCCGTAGTCCCTTGCAACACCTGTGCCTGTGGCTGTGATTCTACAAATACCAAAAAATGCAATCCCAATTCTCCGGCAATGCTTCTTCCTGCAGAAGCTCTTCTTATACCCTTTGAAAACAGGTCCGCAAAGACGGTTGCTTGGGCCAAAATGAAGCATTTTACGATTCCCAAAAGATTACCCTGTGCTGACAACTGCGGAGTCAGCATAAACTGGCATGTGGTTTCCGACTACAAAGGTGGGTGGAGTGCTCGAATCACCATGTTCAACTGGATGACTACCCAGTTTGAGAATTGGTTCACCGCCCTCCAATTCAAGAAGACTCCTCGCGGCTACCAAGCAGCATATTCTTTTAATGCCACAACCATTCCAAAGCTCAACCATACTATTTTCTTGCAAGGATTTATCGGAGCAAACTATCTTATAGCTTTGGACAACAAATCAAACCCACATGTTCCCGGAAAACAACAATCCATTATTTCCTTTACCAAGAAGTATTCACCAAATATCAAAATTGCAAAAGGAGATGGCTTCCCTTCCAAGGTCATTTTTAACGGCGAAGAGTGTTCCCTTCCTACCAGATTCCCTGTCAAAAGTGGAAACCAACCTAATGTTGTTGTAGATTTAGCATACCAACTCTTGTTTTTCGCTTTAGCTTTTACAATCACTCAACTGCTGTAA 2109 0.4376 MLQCDLFFTHFWSFHALHFLSLQNTTSHSLYHHIHFSFLLRPRKQEGMANTSLSSVAAIVALLVSCGILIQECEGQGQQAKALPPAGETCNGIFISYDFLKRTKEYPHVKNVTAQSWAFSSTASVLNTGKEVFKAWKLFIEFQHDEILVSVSGGNIEEATEFPASVGNGTTFVGASQPDLDSAINTAQDLTQIQAVIDLTGTQFGVKPPTVPMPKTIKLVNDGYKCPKPTTHKSSMYACCKKDPKAKISVAKKTKFLGRQKGDLLISYDVTQVYDDNYFVQVTMDNEHFLGRLDNWNLTWEWTRGEFIYSMKGAFTREIESLSCINGEAGKYYAGLDFSKVLNCQKNPIVSDLPSEKYNDSELGKIPNCCRDGNLLPILMDPSKSKSAFTMQVYKIPPDLNKTAIYPPEKWQITGILNPHYKCGLPRRVEPVRFPDTRGLKAEVIAISSWQIVCNITKPTRRNTRCCVSFSSYYNDSVVPCNTCACGCDSTNTKKCNPNSPAMLLPAEALLIPFENRSAKTVAWAKMKHFTIPKRLPCADNCGVSINWHVVSDYKGGWSARITMFNWMTTQFENWFTALQFKKTPRGYQAAYSFNATTIPKLNHTIFLQGFIGANYLIALDNKSNPHVPGKQQSIISFTKKYSPNIKIAKGDGFPSKVIFNGEECSLPTRFPVKSGNQPNVVVDLAYQLLFFALAFTITQLL* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0067 702 PANTHER COBRA-LIKE PROTEIN 7 54 699 - -
Vra11g0067 702 PANTHER COBRA-LIKE PROTEIN 7 54 699 - -
Vra11g0067 702 Pfam COBRA-like protein 278 457 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0067 Vra-Chr11 485308 487657 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0067 84 687 COBRA Gene Family AT3G20580 55.665 0.0 717
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0067 - - gmx:100799716 1014.99