Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1615 ATGCTGGGAGCAGAAGCAAAGGAGCAAGGGAATTGCACAAGATTTAGAGGACAACAGAAACCACATTGTTGCAAGAAGGAACCAGTTATCATTGATCTCATGCCTGGAACTCCCTACAACATGCAGACCGCAAATTGCTGCAAAGCTGGCATCCTTACATCCCTTAAACAAGATCCTACAAAACTCGGTGCCACCTTCCAAATGAATTATGTAAAACCATCACTCTCCGATTCAGCTCCCGCTTTTACCATGCCAGAAAATTTCACCCTTGGAATTCCTGGCTATAGCTGTGGGACACCATTTCAAGTCCCGCCAACCATGTTTACCAAAGACGGACACAGATGGCAACAAGTCTTGGAGACTTGGAATGTGACTTGTATTTACTCCCAGTTTCTAGCATCACCTGCTCCAAAATGTTGCGTCTCTCTGTCTGCATTCTACAACAGTACTATCGTTCCTTGTCCCACATGCAGTTGTAATTGCCAAGGACTACCAGGAGCGACTTGTGTTGATTCTGATAAGACTTCAATGTTGCAACTGCCACAACCGAATCGCGGAGAAGCAGCAGCACCGGTGATCAGGTGTTCACATCACATGTGCCCCATTCGTATTCACTGGCATGTGAAACAAAGTTACAAAGAGCATTGGCGGGTGAAGATCACGATCACAAACATGAACTTTGCGAAAAACTATTCCCAATGGAATTTGGTGGTGCTGCACCCTAACTTGGGAAACGTAACTCAGGTGTTCAGTTTCAACTACGAAGCTCTAACAGTTCATGGAAAATTGAGGGACATAGGGATGTTTTGGGGGCTGGCGTATTACAATGACATGTTGCTTACACACGGAGAGAATGGGAATGTGCAAACAGAGGTGTTACTACATAAAGATCGAGGAAAGTTCAGCTTCAGAGAAGGGTGGAGTTTTCCTAGAAAAGTTTCATTCAATGGCGATGAATGTGTGATGCCATCTCCTGATGCATATCCTAGACTTCCCAACGCAGCTCATGTTGCCATAACAAGCCTTAACACAATTTTCTTTTCACTGTTACTCATACTCTTATAG 1065 0.4451 MLGAEAKEQGNCTRFRGQQKPHCCKKEPVIIDLMPGTPYNMQTANCCKAGILTSLKQDPTKLGATFQMNYVKPSLSDSAPAFTMPENFTLGIPGYSCGTPFQVPPTMFTKDGHRWQQVLETWNVTCIYSQFLASPAPKCCVSLSAFYNSTIVPCPTCSCNCQGLPGATCVDSDKTSMLQLPQPNRGEAAAPVIRCSHHMCPIRIHWHVKQSYKEHWRVKITITNMNFAKNYSQWNLVVLHPNLGNVTQVFSFNYEALTVHGKLRDIGMFWGLAYYNDMLLTHGENGNVQTEVLLHKDRGKFSFREGWSFPRKVSFNGDECVMPSPDAYPRLPNAAHVAITSLNTIFFSLLLILL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1615 354 PANTHER PROTEIN COBRA 1 352 IPR006918 GO:0010215|GO:0031225
Vra10g1615 354 PANTHER COBRA-LIKE PROTEIN 6 1 352 - -
Vra10g1615 354 PIRSF COBRA 1 354 IPR006918 GO:0010215|GO:0031225
Vra10g1615 354 Pfam COBRA-like protein 1 129 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1615 Vra-Chr10 20701442 20702877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1615 1 335 COBRA Gene Family AT5G60920 52.047 6.70e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1615 - - lang:109329241 560.836