Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1571 ATGGGGAAAAGTGAGCAACAGCATGTGCAGGAAGAAGGGCAGAGTGGTGGGAGTGAGGTTGAGGCTCCACTCTGTTGGGTCCTTCTTCGACCATTCAGTTTCAAGTGTCTGTTCCTTCTCCTTCTCAGTTTGTCGGCTTTGATTTCTTCACTCTTTTGGGTTCTTCCCAGGCACACCGTTACTTATAGTTTTGATGCGAGAGATGTAATCAAGCAAAATGCTGCTGTTCAGACATCCTTCAGACTGGAAAAACCAGTTTCACAGCTTATTCCATATATTGAAACGTTAGAATATGATATATATGGCGAAATAGCTCTACCAAATACAAAGGTGGCTATCCTGTCCATGCACCAAAGTATTACACCTAACTGTACTGACGTGGTGTTTGGTGTTCTCTGTGATCCGATGAAAGGTTCAATAAATCCAGTGTCCTTGAGTGTGCTGAGATCATCTTTGATTGAACTGTTTCTCAAGCAATCCAACCTGACTTTGACACCATCAATATTTGGGAATGCATCGATATTTGAAATCTTAAAGTTTCCTGGAGGATTAACTGTAATACCACCGTACTCTGCTTACATTTGGCAGATGCCTGAGGTGCTGTTTAATTTTACTCTTAACAATTCAATATCTGAAGTGCTGGAGAATTTTGATGACTTCAAGTATGAATTGAAGTCTGGATTGCATCTAAACTCTGACGAGAATGTGTACGTGCAAATAACGAATGAAAATGGCTCAACGACAGCTCCTCCAGTAGTAGTCCAGGCTTCAGTCATGCCAGGCTATGGTAGCCTCTTGCCCCAAAGATTAAAACAATTAGCTCAAACAATAACAGGTTCTGCTGGCAAAAATCTTGGCCTTGATAACTCAGTTTTTGGCAGAGTTAAAGAAGTCAGACTATCTACTTTCTTGAAGAAAAAACTTCATGCCTCCTCACCTTCTCCTTCTCCAGCTCCATCCCCACAGTTAAGTGATCACTCTGAGCCATCAACTTCACCACATCCTGCTAGTCCGTACTCTCCAATATCACCAGCAACTGCTGAGCCATCTCCCTGTTTTGACTGTGAAGTATCTTCACCTGCACCATCTATTGTGCCTGAGCATCCTCCCGATCCTTGTCCATATAGTGGCTTCGTACATTATCCCATCTCTTCACCAAAGTCTTATTCTAATCCATCCATCTCTTCACCTTCTGCTGCCCCCACCTCAAATTCTGCCACTACTGAAGAAGCTTCTGATCTGTCCCATGGATCCAAGCGTCGGAAGGGTGAGGAAACATCTAAAAAATTGGTGTCTCAGATGCATGCTCCATCCTCTATATGA 1323 0.4308 MGKSEQQHVQEEGQSGGSEVEAPLCWVLLRPFSFKCLFLLLLSLSALISSLFWVLPRHTVTYSFDARDVIKQNAAVQTSFRLEKPVSQLIPYIETLEYDIYGEIALPNTKVAILSMHQSITPNCTDVVFGVLCDPMKGSINPVSLSVLRSSLIELFLKQSNLTLTPSIFGNASIFEILKFPGGLTVIPPYSAYIWQMPEVLFNFTLNNSISEVLENFDDFKYELKSGLHLNSDENVYVQITNENGSTTAPPVVVQASVMPGYGSLLPQRLKQLAQTITGSAGKNLGLDNSVFGRVKEVRLSTFLKKKLHASSPSPSPAPSPQLSDHSEPSTSPHPASPYSPISPATAEPSPCFDCEVSSPAPSIVPEHPPDPCPYSGFVHYPISSPKSYSNPSISSPSAAPTSNSATTEEASDLSHGSKRRKGEETSKKLVSQMHAPSSI* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1571 440 MobiDBLite consensus disorder prediction 307 345 - -
Vra10g1571 440 MobiDBLite consensus disorder prediction 386 412 - -
Vra10g1571 440 MobiDBLite consensus disorder prediction 413 429 - -
Vra10g1571 440 PANTHER F20B24.21 3 438 - -
Vra10g1571 440 PANTHER F20B24.21 3 438 - -
Vra10g1571 440 MobiDBLite consensus disorder prediction 386 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1571 Vra-Chr10 20400778 20405856 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1571 1 304 C3H Transcription Factor Family AT3G10810 41.720 8.65e-59 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1571 - - gmx:100788006 635.565