Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1568 ATGGTTCAGGGAAGAGGTATTAGTGCAACAATGGTTGTGTTGTGCATGTTGGGAGTTTTCTCTGAGATGGCTCATGCAACAACGTACGTGGTTGGAGGTCACACTGGTGGTTGGGCTTTCAACATGACTGGTTGGCCTACTGGAAAGAATTTTAAGGCTGGTGACATATTAGTATTTAATTATAATCCGCAATATCACAACGTCGTGACAGTGGACGAAACTGGATACAATTCGTGTACTGCTGCACCAGGATCAAAAACGTATCAGTCAGGGCATGATAGCATTACTCTTGCCAAAGGAACGACCTACTTCATCTGCACTTTTTTTGGTCACTGCGAGGCTAAGATGAAAATTGCAGCTACGGCTGCATGA 372 0.4435 MVQGRGISATMVVLCMLGVFSEMAHATTYVVGGHTGGWAFNMTGWPTGKNFKAGDILVFNYNPQYHNVVTVDETGYNSCTAAPGSKTYQSGHDSITLAKGTTYFICTFFGHCEAKMKIAATAA* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1568 123 SUPERFAMILY Cupredoxins 28 119 IPR008972 -
Vra10g1568 123 PANTHER BASIC BLUE-LIKE PROTEIN 9 120 - -
Vra10g1568 123 ProSiteProfiles Phytocyanin domain profile. 27 123 IPR003245 GO:0009055
Vra10g1568 123 CDD Plantacyanin 27 122 IPR041844 -
Vra10g1568 123 Gene3D - 27 122 IPR008972 -
Vra10g1568 123 PANTHER BLUE COPPER PROTEIN 9 120 IPR039391 GO:0009055
Vra10g1568 123 Pfam Plastocyanin-like domain 41 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1568 Vra-Chr10 20365182 20365640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1568 7 122 Phytocyanin Superfamily AT1G17800 40.496 9.40e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1568 - - mus:103987231 158.688