Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1555 ATGGCATCGTCCAAGGTGGTGGTCGCGACGAATCCCGATGTGGCGCCGCAGAGTTCGATTTCGAGCCAGGTATGGGACGAGGTGGTCGGGGGCGCTGAGTCTCAGGACATGGCAATCAGCCTCCATGATTTGTTGTTGACCTCCGTTGCCAGAAACGACGTCGTTCCGCCCTCTCACGGGGGAAGGGGAAAGAGAAAGGCTGTGGAGGAAGCCGTCGTGGATAGGGCTACTCTTCAGAAACAGAGAAGGATGATAAAAAACAGAGAATCTGCCGCTAGGTCCAGGGAACGCAAGCAGGCTTATACAGTTGAGTTAGAGTCTTTGGTTACAATTCTCGAGGAAGAGAATGCTCGATTGTTAAAGGAAGAGGCTGAAAGGAGAAGGCAGAGGTTCAATCAGCTCATGGAGTGCCTTATTCCAGTTGAGGAGAAGAGTAAACCAAGACGAATGCTTCGGCGAGTGAATTCAGCCCAGTGGTGA 480 0.5229 MASSKVVVATNPDVAPQSSISSQVWDEVVGGAESQDMAISLHDLLLTSVARNDVVPPSHGGRGKRKAVEEAVVDRATLQKQRRMIKNRESAARSRERKQAYTVELESLVTILEEENARLLKEEAERRRQRFNQLMECLIPVEEKSKPRRMLRRVNSAQW* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1555 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Vra10g1555 159 PANTHER OS05G0437700 PROTEIN 50 158 - -
Vra10g1555 159 Pfam bZIP transcription factor 77 126 IPR004827 GO:0003700|GO:0006355
Vra10g1555 159 SMART brlzneu 75 139 IPR004827 GO:0003700|GO:0006355
Vra10g1555 159 Gene3D - 78 136 - -
Vra10g1555 159 CDD bZIP_plant_BZIP46 79 125 - -
Vra10g1555 159 Coils Coil 102 134 - -
Vra10g1555 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 129 IPR004827 GO:0003700|GO:0006355
Vra10g1555 159 SUPERFAMILY Leucine zipper domain 79 130 IPR046347 GO:0003700|GO:0006355
Vra10g1555 159 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 50 158 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1555 Vra-Chr10 20273437 20275469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1555 60 159 bZIP Transcription Factor Family AT5G44080 59.804 2.53e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vra10g1555 bZIP_1 1.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1555 K14432 - gmx:100101878 183.726