Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1549 ATGAGAGATATAGGGAAATTAATGCATGGGTTGAAACCAGCCCTGCTGATGTTGATGGTGCAGATCGCATTTGCTTCCGTGAACGTGCTCTACAAACTTGCCATAAATGATGGAATGAGCGTGAGAATAATCACTGCCTACCGTCTCATTTTCGCTGCAGCTTCTACAGTTCCTCTTGCTCTTATTTTTGAAAGGAAAAACATACGAACGCTGACTTGGAGGGTGATTTTAAAGTCATTTTTCTGTGGATTATTCGGGGGAAGTCTATTCCAAAACCTTTATTTCGAGTCCTTGAAATTGATTTCAGCAACATTTGCTTCTGCTGTTTTTAATCTCATTCCTGCCGTCACTTTTATCTTGGCCGTCACTTGCGGTTTCGAAAAATTAAATTTCCAAAGGGCAGCTGGTAAGGCTAAGGTGTTGGGAACGATAACAGGAGTTGGCGGGGCAATGATGCTGACCTTTCTCAAAGGTGTAGAAATCAACATCTGGACCTTCCACATTAACCTTTTGCATAAAAAGGGTACCACGGAAACGCTAAATGGTGACTCTGGAAGTAAATTGCTAGGAGTTTTTTGTGGTCTTGGAAGCTGCTTATGTTTTGCATTATGGCTCATTATTCAGGCTCAGATGAGTAAAGAGTTCCCAGGCCATCACTCAAGTACAGCTTTGATGTCAACAATGGGGGCAATTCAAGCCACTGTTTTTGCCCTGTGTATTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAACATTAGGCTTCTAGCTTCAGCATATTCGGGAATTGTGGCTTCTGGAATAATGGTTGTTGTGATAGCATGGTGTGTAAGGATGAGGGGTCCATTGTTTGCATCTGTTTTCAATCCTCTACTGCTAGTGCTTGTGGCCGTTGCTGGTTCCCTGATGTTGGATGAGAAGCTATACGTAGGAAGTGTTATGGGAGCAGTGCTGATTGTGATGGGATTGTACATGGTGCTGTGGGGTAAGAGCAAGGAAATGAAAAGAGTGAGTGACTTAGAAACTACTCCAGAAATAGAAGAAATTGAGGTTGTTGTGACGTGTAGGGCAACAGAGGATGATAAAAGCAACGACAAGTACACCTGTAGTGAGAGGAACATTATTGAGAAGGATAATGATAATGCATCAAAAAGCAGAGATGAAGGACAAGACAACGAAAGTAGTGGGAAAGAAGATATGGGTAGCTCTGGGGAAGCCTTGAAGACCTAA 1230 0.4293 MRDIGKLMHGLKPALLMLMVQIAFASVNVLYKLAINDGMSVRIITAYRLIFAAASTVPLALIFERKNIRTLTWRVILKSFFCGLFGGSLFQNLYFESLKLISATFASAVFNLIPAVTFILAVTCGFEKLNFQRAAGKAKVLGTITGVGGAMMLTFLKGVEINIWTFHINLLHKKGTTETLNGDSGSKLLGVFCGLGSCLCFALWLIIQAQMSKEFPGHHSSTALMSTMGAIQATVFALCIEKDWSQWRLGWNIRLLASAYSGIVASGIMVVVIAWCVRMRGPLFASVFNPLLLVLVAVAGSLMLDEKLYVGSVMGAVLIVMGLYMVLWGKSKEMKRVSDLETTPEIEEIEVVVTCRATEDDKSNDKYTCSERNIIEKDNDNASKSRDEGQDNESSGKEDMGSSGEALKT* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1549 409 MobiDBLite consensus disorder prediction 360 395 - -
Vra10g1549 409 PANTHER WAT1-RELATED PROTEIN 12 356 IPR030184 GO:0016021|GO:0022857
Vra10g1549 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 332 - -
Vra10g1549 409 MobiDBLite consensus disorder prediction 360 409 - -
Vra10g1549 409 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020|GO:0016021
Vra10g1549 409 Pfam EamA-like transporter family 12 152 IPR000620 GO:0016020|GO:0016021
Vra10g1549 409 PANTHER WAT1-RELATED PROTEIN 12 356 - -
Vra10g1549 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1549 Vra-Chr10 20219744 20222062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1549 11 351 Nodulin-like Gene Family AT1G25270 40.580 7.36e-91 276