Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1548 ATGGAGAAGTTGAACGTGGTACATGCATTGAAGCCAGTTCTGCTAATGGTGTTGGTGCAGGTTGCAAATGCTTGGGTCAATGTTCTCTACAAGCTCGCCCTTAACGATGGCATGAACTTGAGTATCATCGTTGCTTACCGCTATGTTTTCGCCACTGCTTTCATTGCTCCACTAGCTTTTCTTATTGAAAGGAAGACGAGGACGAAGATGACTTGGACGATACTTTTTCAGGCATTCGTATGTGGCTTAATTGGTGGAGCTTTGCCTCAAAACTTAAACATGGAAGCAATCGCTTTAACTTCAGTAACATTCACTACTGCCATATCCAATCTCATCCCGGCCCTCACCTTCATCATATCCCTTTCCTTCGGATTGGAGAGATTGAATTTAAAAACAGCAGGAGGGAAGGCGAAGATAATTGGAACAATAACTGGAATTAGTGGAGCAATGATTCTAACTTTCTTGAAAGGCCCAGAAGTTCAGATGCTTTCGTTCCACATAAATCTTTTCAACCATCCAAACGGCAATGTCGTACATCCACACGCTACTTCTGGCGTTATGACCATATTCGGTGCACTCGCGTCTGTCGCAAGCAACGTCTCTTATGCACTATGGCTTATCATTCAGGCAAAAATGAGTGAAAGATACCCTTGTCCTTATTCAAGCACAGCGTTAATGTCCCTAATGGGGGCACTGTTATCCGTTTCTTATGCATTTTGTGTTGAAAGAGATTTGAGTGAGTGGAGATTGGGCTGGAATATCAGACTGTTGACTGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTGGCTGTGATTTCGTGGTGTGTACGCGCGAGAGGTCCATTGTTTGTCTCTATTTTCAGCCCTCTTATGCTTGTGGTTGTGGCCTTTGCTGGATCCACTATTTTGGACGAGAAGCTATATCTTGGGAGCATAATTGGATCAGTGATGATTATTTGCGGATTATACGTGGTTCTGTGGGGTAAAAGCAAAGAGATGAAGAAGAATCAATCGGTTCCATCAGAAAGCGCCCATAAATTAGACACAGTTGAAATAATGGTCAAACCTCGAGTAGAAGAAAAGAGCAACAATAGCAATAGCCTGGTGAATGCTGTAAATGCGGTTGGGGAAAATGGAGAGAAGAAGTAA 1155 0.4329 MEKLNVVHALKPVLLMVLVQVANAWVNVLYKLALNDGMNLSIIVAYRYVFATAFIAPLAFLIERKTRTKMTWTILFQAFVCGLIGGALPQNLNMEAIALTSVTFTTAISNLIPALTFIISLSFGLERLNLKTAGGKAKIIGTITGISGAMILTFLKGPEVQMLSFHINLFNHPNGNVVHPHATSGVMTIFGALASVASNVSYALWLIIQAKMSERYPCPYSSTALMSLMGALLSVSYAFCVERDLSEWRLGWNIRLLTVAYAGIVVSGVMVAVISWCVRARGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSVMIICGLYVVLWGKSKEMKKNQSVPSESAHKLDTVEIMVKPRVEEKSNNSNSLVNAVNAVGENGEKK* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1548 384 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020|GO:0016021
Vra10g1548 384 Pfam EamA-like transporter family 11 149 IPR000620 GO:0016020|GO:0016021
Vra10g1548 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 144 - -
Vra10g1548 384 PANTHER WAT1-RELATED PROTEIN 11 362 IPR030184 GO:0016021|GO:0022857
Vra10g1548 384 PANTHER WAT1-RELATED PROTEIN 11 362 - -
Vra10g1548 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
Vra10g1548 384 MobiDBLite consensus disorder prediction 361 375 - -
Vra10g1548 384 MobiDBLite consensus disorder prediction 361 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1548 Vra-Chr10 20210139 20213796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1548 1 348 Nodulin-like Gene Family AT1G68170 45.272 9.56e-103 306