Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1544 ATGGTCATGGATGTTCACCACTACCACCCTTTCTCTGTTTACTTCATTGCTTCCATTCTCTTTGTTTTCTTCATCTTATACAAATTACTTCAAAGCTGGAGTTCAAACAACTCCTCTACCAATTTACCTCCAGGACCTNCNACACTNCCTCTCATAGGGAACTTGCATCAGTTGNTAGGTTCATTGCCACATCNCTCTTTAAAACTTTTGGCAGATAAGTACGGACCGTTAATGCACCTGAAACTAGGAGAGGTATCCAACATCATAGTCACTTCACCGGAGATAGCCCAAGAGGTTCTGAAAACACATGATGCTAATTTTTCTGATAGGCCAAACCTTACATCGGCTAGAACAATTTCTTACAACAATACCACCATAGCCTTCTCTCCATATGGAGAATATTGGAGACTGGTACGAAAGATATGCACAGTGGAGCTACTAACCACAAAGCGAGTGCAATCTTTTCGGTCCATAAGGGAAGAGGAGGTGGCAGAAGTGGTTAAGAAAATAGCTGCAAGTGAAGGCTGTGCCGTTAATCTCACCCAGAACATTTTCCCGATGACTTACGGAATAGCCGCACGAGCGGCTTTTGGTAAAAAAGGAAGATATCAACAACTGTTCATTTCAAAGATGGAGGAGCAATTGAAGCTCATGGGAGGGTTTTCGCTAGCTGATCTCTATCCTTCTAGCAGAGTGTTTGAAATGGTGGAGAAGGTGAAGTTTGAGAAAATTCACAAAGAGATTGACAGGGTTTTGCGAGACATTATCGACGAACACAGAAATAGAAGCAAGTGTGAAGAAGTGGAAGATCTGGTCGATGTTCTTCTCAAGTATCAACAGGAAAACNATTCTGAAAATGTCTTAACTGATGACAACATTAAAGCGGTCATCCAGGACATATTCGTGGGTGGAGGAGAGACTTCATCTACCACAGTGGAATGGACGATGTCAGAATTGATAAGAAACCCAAGGGTGATGGAAAAAGCACAAGCTGAGGTGAGAAGAGTGTATGGTAAGAAGGGATACGTGGATGAGACAGAATTACAGAAACTGATATACTTGAAGTCCATAATCAAAGAGACAATGAGGTTACACCCACCTGTACCATTGTTANTTCCGAGAGAAAGTAGAGAAAGGTGTGAAATCAATGGATATGAGATACCCTCAAAGACAAGGGTCATTATCAACGCTTGGGCAATTGGAAGAAATGCTGAGTATTGGAGTGAAGCTGAGAGTTTCAAACCTGAAAGNTTTCTTAATAACGGTATCGATTTCAAAGGTGCAGACTTTGCATTTATCCCATTTGGTGGTGGAAGAAGGATCTGCCCAGGCATTACATTTGCCATCCCNAACATNGAGTTGCCACTTGCTCAGTTACTTTACCATTTTGATTGGAAGCTTCCCAACAATTTGAAGAATGATGAACTTGACATGGCCGAGTCCGGTGGAATCACTCTCAGAAGAAAAAATGACCTCTACTTGATTCCCATCCCTCGTCAAACTTAA 1506 0.417 MVMDVHHYHPFSVYFIASILFVFFILYKLLQSWSSNNSSTNLPPGPXTLPLIGNLHQLXGSLPHXSLKLLADKYGPLMHLKLGEVSNIIVTSPEIAQEVLKTHDANFSDRPNLTSARTISYNNTTIAFSPYGEYWRLVRKICTVELLTTKRVQSFRSIREEEVAEVVKKIAASEGCAVNLTQNIFPMTYGIAARAAFGKKGRYQQLFISKMEEQLKLMGGFSLADLYPSSRVFEMVEKVKFEKIHKEIDRVLRDIIDEHRNRSKCEEVEDLVDVLLKYQQENXSENVLTDDNIKAVIQDIFVGGGETSSTTVEWTMSELIRNPRVMEKAQAEVRRVYGKKGYVDETELQKLIYLKSIIKETMRLHPPVPLLXPRESRERCEINGYEIPSKTRVIINAWAIGRNAEYWSEAESFKPEXFLNNGIDFKGADFAFIPFGGGRRICPGITFAIPNXELPLAQLLYHFDWKLPNNLKNDELDMAESGGITLRRKNDLYLIPIPRQT* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1544 501 Gene3D Cytochrome P450 35 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 Pfam Cytochrome P450 43 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Vra10g1544 501 PANTHER CYTOCHROME P450 71B11-RELATED 13 499 - -
Vra10g1544 501 SUPERFAMILY Cytochrome P450 43 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1544 501 PANTHER CYTOCHROME P450 71D10 13 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1544 Vra-Chr10 20186442 20188267 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1544 15 496 Cytochrome P450 AT3G26300 41.785 8.38e-135 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1544 - - gmx:606548 724.546