Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1543 ATGGTCATGGATGTTCACCACTACTACCCTTTCTCTGTTTACTTCATTGCTTCCATTCTCTTTGTTTTCTTCATCTTATACAAATTACTTCAAAGCTGGAGTTCAAACAACTCCTCTACCAATTTACCTCCAGGACCTGCGACACTGCCTCTCATAGGGAACTTGCATCAGTTGTTAGGTTCATTGCCACATCGCTCTTTAAAACTTTTGGCAGATAAGTACGGACCGTTAATGCACCTGAAACTAGGAGAGGTATCCAACATCATAGTCACTTCACCGGAGATAGCCCAAGAGGTTCTGAAAACACATGATGTTAATTTTTCTGATAGGCCAAACCTTACATCGGGTAGAGCAATTTCTTACAACAATACCAGCATAGTCTTCTCTCCATATGGAGAATATTGGAGACTAGTACGAAAGATATGCACAGTGGAGCTACTAACCACAAAGCGAGTGCAATCTTTTCGGTCCATAAGGGAAGAGGAGGTGGCAGAAGTGGTTAAGAAAATAGCTGCAAGTGAAGGCTGTGCCGTTAATCTCACCCAGAACATTTTCCCGATGACTTACGGAATAGCCGCACGAGTACCCAGCCGGTTTGGACAAGATTGCGTGAAGCCAAGGCGAGGTTGTAGTAGCTTGTACACGAGGAGCGTCCGGAGGTTTGGGGAGAGTCGTATTGTAGTGGTTAGAGAAGTTCATTCGGAACAATAG 711 0.443 MVMDVHHYYPFSVYFIASILFVFFILYKLLQSWSSNNSSTNLPPGPATLPLIGNLHQLLGSLPHRSLKLLADKYGPLMHLKLGEVSNIIVTSPEIAQEVLKTHDVNFSDRPNLTSGRAISYNNTSIVFSPYGEYWRLVRKICTVELLTTKRVQSFRSIREEEVAEVVKKIAASEGCAVNLTQNIFPMTYGIAARVPSRFGQDCVKPRRGCSSLYTRSVRRFGESRIVVVREVHSEQ* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1543 236 Pfam Cytochrome P450 43 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1543 236 SUPERFAMILY Cytochrome P450 41 196 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1543 236 Gene3D Cytochrome P450 35 224 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1543 236 PANTHER CYTOCHROME P450 71D10 13 203 - -
Vra10g1543 236 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1543 236 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1543 236 PANTHER CYTOCHROME P450 71B11-RELATED 13 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1543 Vra-Chr10 20180062 20185222 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1543 11 195 Cytochrome P450 AT5G25130 46.842 3.79e-47 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1543 - - vra:106774989 466.077