Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1525 ATGAGTCAGCGTGTAGGTGACGAGTCTGTGAAAAAAGCCATGGGAGAAATAAGAAGTGGAACATCTTCACGCAGGCATGGAGATACTTTGCCACACATTCATAAGGTGGGATCTCCTCCTAAGCAGACACTTTTCAAAGAGATCAAAGATTCTGTGGCTGAGACTTTCTTCCCAGACAAACCCTTAAACAAATTTAAAGACCAGAGCTTCTTTGGAATCATTGTATTAGCCCTGCAGTCTCTCTTCCCCATTTTAGAATGGGGAAGACATTACAATCTTAAAAAATTCAGAGGTGATTTGATTTCTGGACTCACTATTGCAAGTCTCTGCATCCCTCAGGACATTGCATACGCAAAGCTTGCTCATTTGGATCCACAATATGCACTATACACAAGTTTTGTGGCTCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGACATTGCAATTGGACCAGTAGCGGTTGTGTCGCTCTTGCTTGGGACAACGCTGTCGGATGAGATCAGCAACTTCAAAAGTCATGAATACCTGCGTCTTGCATTTACTGCCACCTTTTTTGCAGGAGTCACTCAAATGGCACTGGGTGTTCTCAGGCTTGGTTTCTTGATTGACTTTTTGTCTCATGCTGCCATTGTGGGATTCATGGCTGGAGCTGCCATTACAATTGCACTGCAACAGCTTAAGGGTTTTCTTGGCATAAAAGACTTCACTACGAATACTGATATTGTTTCTGTCATGCGCTCAGTGTTTAAAGCAGCACACCACGGGTGGAATTGGGAGACAATAGTCATCGGGTTAGCATTCTTGATTTTCCTTCTTGTAACCAAGTACATCGCTAAAAGGAACAAGAAACTCTTCTGGGTGGCTGCAATTTCTCCTATGATATCTGTCGTAGTGTCTACCTTTTTTGTCTACATTACCAGGGCAGACAAGAAAGGAGTGGCAATTGTGAGACATGTTAAGAAGGGTGTGAATCCATTATCTGCCAGCGAGATATTTTTCAGCGGAAAATACCTAGGCGCCGGTATTCGTGTTGGTGTGATATCTGGCATGGTAGCTCTCACGGAAGGCGTAGCAATTGGGAGAACATTTGCTGCAATGAAAGACTATGCACTGGATGGTAACAAAGAAATGATTGCAATGGGAGCAATGAACATGGTTGGTTCTCTAACATCTTGCTATGTGGCAACAGGCTCATTTTCTCGCTCAGCAGTGAACCACATGGCCGGTTGTAAAACTGCAGTATCGAACATCGTTATGTCGATAGTTGTGTTGTTGACTCTGCTACTCATTACGCCGCTCTTTAAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCTGCGGTGCTTAGCCTTATCAACATTGAAGCTATGATTCTTTTATGGAAGATTGACAAGTTCGATTTTGTTGCTTGCATGGGAGCCTTGTTTGGTGTGATCTTCAAAAGTGTCGAGATTGGCCTTCTAATCGCGGTGGCCATATCTTTTGCCAAAATTCTCGTACAAGTGACAAGGCCAAGGGTTGCAGTACTAGGGAAGCTTTCAGGAACTACAGTTTATAGGAACGTCCAGCAATACCCCAAAGCAGCCCAGATTAATGGCATGCTCATTGTCAGGGTTGACTCCGCAATCTACTTCTCAAACTCCAACTACATCAAGGAGAGAATTTTGAGATGGCTGAGCGAAGAAGAAGTCCAAAGGACAGCAAGTGGATTATCCGGAATAGAATATCTCATTGTGGAGATGTCACCTGTAACTGATATTGACACAAGTGGCATCCATGCCTTTGAAGAGTTATACAAGAGTCTCCAGAAAAGAAAAATCCAGCTTATCTTGGCAAACCCAGGACCAATTGTAATAGAGAAGCTCCATGCGTCAAAGTTAACAGACGTAATCGGAGAAGATAAGATATTTCTAACAGTGGCAGATGCTGTTTCAACCTTTGGTCCAAAGGGTGAAGGAGAAGTATGA 1977 0.4335 MSQRVGDESVKKAMGEIRSGTSSRRHGDTLPHIHKVGSPPKQTLFKEIKDSVAETFFPDKPLNKFKDQSFFGIIVLALQSLFPILEWGRHYNLKKFRGDLISGLTIASLCIPQDIAYAKLAHLDPQYALYTSFVAPLVYAFMGSSRDIAIGPVAVVSLLLGTTLSDEISNFKSHEYLRLAFTATFFAGVTQMALGVLRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGFLGIKDFTTNTDIVSVMRSVFKAAHHGWNWETIVIGLAFLIFLLVTKYIAKRNKKLFWVAAISPMISVVVSTFFVYITRADKKGVAIVRHVKKGVNPLSASEIFFSGKYLGAGIRVGVISGMVALTEGVAIGRTFAAMKDYALDGNKEMIAMGAMNMVGSLTSCYVATGSFSRSAVNHMAGCKTAVSNIVMSIVVLLTLLLITPLFKYTPNAVLASIIIAAVLSLINIEAMILLWKIDKFDFVACMGALFGVIFKSVEIGLLIAVAISFAKILVQVTRPRVAVLGKLSGTTVYRNVQQYPKAAQINGMLIVRVDSAIYFSNSNYIKERILRWLSEEEVQRTASGLSGIEYLIVEMSPVTDIDTSGIHAFEELYKSLQKRKIQLILANPGPIVIEKLHASKLTDVIGEDKIFLTVADAVSTFGPKGEGEV* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1525 658 MobiDBLite consensus disorder prediction 9 32 - -
Vra10g1525 658 Gene3D STAS domain 507 651 IPR036513 -
Vra10g1525 658 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Vra10g1525 658 TIGRFAM sulP: sulfate permease 83 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra10g1525 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Vra10g1525 658 MobiDBLite consensus disorder prediction 1 33 - -
Vra10g1525 658 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 18 654 - -
Vra10g1525 658 PANTHER SULFATE TRANSPORTER 18 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra10g1525 658 SUPERFAMILY SpoIIaa-like 529 651 IPR036513 -
Vra10g1525 658 Pfam STAS domain 528 646 IPR002645 -
Vra10g1525 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1525 Vra-Chr10 20034592 20038121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1525 22 658 Inorganic Solute Cotransporters AT1G22150 71.473 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1525 K17470 - gmx:100784124 1109.75