Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1524 ATGAGTCAACGCGTGAGTGACGAGAGTGTGAGAAAGGACATGGAGGAAATAAGAAATGGGGCATCTTCACGTAAGCATGGAGATACTTTGTCACACATTCACAGAGTGGAATCTCCTCCTAAGCAGACACTTTTCAAAGAGATCAAAGATTCTGTGGTTGAGACTTTCTTCCCAGACAAACCCTTACACAAATTTAAACACCAGACCTTCTTTAGAGTCTTTGGATTAGCCCTGCAATCTTTCTTCCCCATTTTCAAATGGGGCAGAGACTACAATCTTAAAAACTTCAGAGGTGATTTCATTTCTGGACTCACCATTGCAAGTCTTTGCATCCCTCAAGACATTGCATACGCAAAACTTGCAAATTTGGATCCCCAATATGCACTGTACACTAGTTTTGTTACCCCTCTTGTGTATGCTTTCATGGGAAGCTCAAGAGATATTGCCATTGGACCCGTAGCTGTTGTGTCCCTCTTGCTTGGGACTACACTGTCCGATGAAATCAGCGACTTCAAAAGTCATGAATACCTGCGCCTTGCATTTACTGCCACCTTCTTCGCAGGAGTCGTTCAAATGGCACTTGGTGTTCTCAGACTTGGTTTCTTGATTGACTTTGTGTCACATGCTGCCGTTGTGGGATTCATGACTGGATCTGCCATTACAATTGCACTGCAACAGCTTAAGGGTTTGCTTGGCATAGAAAACTTCACTAAGAAAACTGATATTGTTTCTGTCATGCGCTCGGTTTTCAGTTCAGCACACCATGGGTGGAATTGGGAGACAATAGTCATTGGATTATCATTCTTGGTTTTCCTTCTTCTAGCCAAGTATATTGGGAAAAAGAATAAGAAGCTCTTTTGGGTGGCTGCAATTTCCCCTATGATATCTGTCATAGTGTCTACCTTTTCTGTCTACATAACCAGAGCAGACAAGAAAGGCGTGGAAATTATTAAACATGTCAAGAAGGGTGTGAATTCATCATCTGCTGGAGAGATTTTTTTTAGTGGAAAATATCTAGGTCCTGGTATTCGTGTTGGTGTAATAGCTGGTATGGTAGCACTCACGGAAGCTGTAGCGGTTGGGAGAACATTTGCTGCCATGAAAGACTACCCACTTGATGGCAACCAAGAAATGATGGCAATGGGAGCAATGAACATCGTTGGTTCTTTAACATCTTGTTATGTGTCTACAGGCGGTTTTTCTCGAACAGCAGTGAACAACATGGCCGGTTGTAAAACTGCAGTATCGAACATCGTTATGTCCATGGTTGTGTTATTGACTCTGCTACTTATTACGCCGCTATTCGAGTACACTCCAAATGCGGTGCTTGCTTCTATTATAATAGCCGCGGTGCTTGGCCTTGTGAACATTGAAGCTATTACTCTTTTATGGAAGATAGACAAGTTCGATTTTGTTGCTTGCATGGGAGCCCTCTTTGGTGTGGTGTTCATAAATGTTGAGATTGGCCTTCTAATTGCGGTGGCTATATCATTTTCTAAAATCCTTTTACAAGTGACAAGACCAAGGACAGCAATATTAGGGAAGCTTCCAGGAACTACTGCTTATAGGAACGTCTGGCAATATCCCAAAGCAACCCAAATTGATGGCATGCTGATTGTCAGGGTGGACTCTGCAATCTACTTCTCAAACTCCAACTATATCAAGGAGAGAATTTTGAGATGGCTGAGTGATGAAGAAACCCAAAGGATAACAAGTGGATTGTCCAGAATAGAGTATCTCACTGTTGAGATGTCACCTGTTACTGATATTGACACAAGTGGCATTCTTGCTTTTGGAGAGTTATACAAGAGTCTTCAGAAAAGAAAAGTGCAGCTTATCATGGCAAACCCAGGACCAATTGTGATAGAGAAACTCCGTGCATCTAAGTTAACAGATGTCATTGGAGAAAATAACATATTTCCAACAGTGGCTGATGTTGTTTCAACTTTTGGTGCAAATGGTGAAGGAGTATTATGA 1977 0.4198 MSQRVSDESVRKDMEEIRNGASSRKHGDTLSHIHRVESPPKQTLFKEIKDSVVETFFPDKPLHKFKHQTFFRVFGLALQSFFPIFKWGRDYNLKNFRGDFISGLTIASLCIPQDIAYAKLANLDPQYALYTSFVTPLVYAFMGSSRDIAIGPVAVVSLLLGTTLSDEISDFKSHEYLRLAFTATFFAGVVQMALGVLRLGFLIDFVSHAAVVGFMTGSAITIALQQLKGLLGIENFTKKTDIVSVMRSVFSSAHHGWNWETIVIGLSFLVFLLLAKYIGKKNKKLFWVAAISPMISVIVSTFSVYITRADKKGVEIIKHVKKGVNSSSAGEIFFSGKYLGPGIRVGVIAGMVALTEAVAVGRTFAAMKDYPLDGNQEMMAMGAMNIVGSLTSCYVSTGGFSRTAVNNMAGCKTAVSNIVMSMVVLLTLLLITPLFEYTPNAVLASIIIAAVLGLVNIEAITLLWKIDKFDFVACMGALFGVVFINVEIGLLIAVAISFSKILLQVTRPRTAILGKLPGTTAYRNVWQYPKATQIDGMLIVRVDSAIYFSNSNYIKERILRWLSDEETQRITSGLSRIEYLTVEMSPVTDIDTSGILAFGELYKSLQKRKVQLIMANPGPIVIEKLRASKLTDVIGENNIFPTVADVVSTFGANGEGVL* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1524 658 SUPERFAMILY SpoIIaa-like 528 650 IPR036513 -
Vra10g1524 658 MobiDBLite consensus disorder prediction 1 30 - -
Vra10g1524 658 PANTHER SULFATE TRANSPORTER 19 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra10g1524 658 TIGRFAM sulP: sulfate permease 83 645 IPR001902 GO:0015301|GO:0016020|GO:0055085
Vra10g1524 658 ProSiteProfiles STAS domain profile. 527 650 IPR002645 -
Vra10g1524 658 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 654 - -
Vra10g1524 658 Pfam STAS domain 528 645 IPR002645 -
Vra10g1524 658 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Vra10g1524 658 Gene3D STAS domain 507 651 IPR036513 -
Vra10g1524 658 CDD STAS_SulP_like_sulfate_transporter 528 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1524 Vra-Chr10 20028269 20032278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1524 22 649 Inorganic Solute Cotransporters AT1G22150 68.839 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1524 K17470 - gmx:100784124 1070.46