Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1517 ATGGAGGGACGGAGTTTGTGCTCACTGATGTTTCTTTTGCTTGCTAATTTGGCCACTCTGAACGCTGTGCATGGCCAAGGGACGCGTGTGGGGTTCTATGCTAGAACATGTCCTCGGGCTGAGTCCATTGTTAGGTCCACAGTTCAATCCCACGTCAGGTCTGATCGTAGTTTGGCTGCTGGGCTGCTTCGGATGCACTTTCACGATTGCTTTGTGCAAGGTTGTGACGGTTCTGTTCTCATTGCCGGTGCTGGCACCGAGAGAACAGCCTTTGCAAACCTTGGTTTAAGAGGATACGAGGTTATTGACGATGCGAAAACGCAGCTAGAGGCTGCATGCCCCGGTGTTGTGTCTTGTGCTGATATCCTTGCTCTTGCTGCTCGTGATTCCGTATTTCTGAGTGGTGGATTGAGTTGGCAAGTGCCTACTGGACGCAGAGATGGGCGAATATCACAGGCTTCTGATGTGAGTAACTTGCCTTCTCCTTTTGACTCTGTTGATGTTCAGAAAGAAAAGTTCACAGCAAAGGGACTCAACACTCAAGACCTCGTCACCCTTGTTGGTGGACATACGATTGGTACCACAGCTTGTCAGTTCTTCCGTAACAGATTGTACAACTTCACTGCAAATGGTGCTGACTCTTCAATCAACCCTTTATTTCTTCCTCGGCTAAGAACATTGTGCCCGCAAAACGGCGGTGATTCAAACCGAGTAGCTCTTGATACCGGTAGTGAATACAGATTTGACACGTCATTCTTTGTCAATTTGAGAAGTGGGCGTGGAATTCTGCTGTCTGATCAAGCGCTTTGGAACGATCCTTCCACCAAGTCATTTGTACAGGGTTATTTGGCCTCCAAACCCTCGTTTTTCAATGTGGAATTTGCAAAATCTATGGTGAAGATGAGCAACATCGAGTTGAAGACTGGGACCGATGGTGAAATTCGCAAGATATGTTCTGCCTTTAACTAG 969 0.4757 MEGRSLCSLMFLLLANLATLNAVHGQGTRVGFYARTCPRAESIVRSTVQSHVRSDRSLAAGLLRMHFHDCFVQGCDGSVLIAGAGTERTAFANLGLRGYEVIDDAKTQLEAACPGVVSCADILALAARDSVFLSGGLSWQVPTGRRDGRISQASDVSNLPSPFDSVDVQKEKFTAKGLNTQDLVTLVGGHTIGTTACQFFRNRLYNFTANGADSSINPLFLPRLRTLCPQNGGDSNRVALDTGSEYRFDTSFFVNLRSGRGILLSDQALWNDPSTKSFVQGYLASKPSFFNVEFAKSMVKMSNIELKTGTDGEIRKICSAFN* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1517 322 Pfam Peroxidase 44 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 CDD secretory_peroxidase 29 321 IPR033905 GO:0004601|GO:0042744
Vra10g1517 322 Gene3D - 31 322 - -
Vra10g1517 322 ProSiteProfiles Plant heme peroxidase family profile. 27 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PANTHER PEROXIDASE 9 320 - -
Vra10g1517 322 PANTHER PEROXIDASE 25-RELATED 9 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Vra10g1517 322 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 Gene3D Peroxidase, domain 2 160 301 - -
Vra10g1517 322 SUPERFAMILY Heme-dependent peroxidases 29 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra10g1517 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1517 Vra-Chr10 19997906 19999694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1517 4 322 Peroxidase AT5G64120 63.110 3.19e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1517 K00430 - gmx:100783523 531.946