Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1511 ATGGCCGACGAGATCAATCGCGGAACGTCCGTCGACTCCACTGAATCACGCTGGGTTTTCCAGGACGACGACGATGACTCCGATTTAGAGAACTTCGACGCGGATTTGAGATTTGGACGCCAAGCTGCCGTCGTTGATTCCGACGAGGAAGAGGACAACGCGGAGCAGAGACTCATCCGCACTGGTCCTCGCATCGATTCATTCGACGTGGAGGCTCTTGAAGTTCCTGGTGCTCACAGAAGTGACTATGAGGACATCAGTGTGGGTAAGAAAGTTGTATTAGCTATTCAGACGCTTGGTGTTGTCTTTGGTGACGTTGGAACAAGTCCCTTGTATACCTTCAGTGTTATGTTTAGAAAGGCCCCTATTAATGGAAATGAAGACATTCTTGGAGCTTTATCACTTGTCTTGTACACATTAATCTTGATTCCTTTGTTGAAGTATGTCCTGGTGGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACGTTTGCCTTGTACTCGTTGATCTGTCGTCATGCTAAGGTTAGTCTTCTCCCCAATCAGTTACCATCAGATGCCCGTATATCAAGCTTTAGGCTTAAGGTGCCATCCCCTGAGCTTGAAAGGTCATTAAAAATCAAGGAAAGACTTGAGAATTCTCTGACTCTGAAGAAGATTCTACTAATATTAGTTCTTACTGGTACTTCCATGGTGATTGCTAATGGTGTTGTTACACCGGCAATGTCAGTACTGTCATCTGTTGGTGGTTTAAAAGTTGGGGTAGATGCTATCGAGAAAGATGAAGTGGTGATGATTTCAGTTGCCTGCCTTGTCATTTTGTTCAGTGTGCAAAAGTATGGAACAAGTAAAGTGGGACTTGCAGTAGGACCTGCTTTGTTCTTATGGTTTTGTTCTCTTGCCGGCATTGGGGTATACAATCTTGTGAAGTATGACAATAGTGTCTTAAGGGCATTTAATCCTATTCATATCTACTACTTCTTCAAAAGGAACTCAACAAAAGCCTGGTATTCTCTTGGGGGTTGCCTACTGAGTGCAACTGGTTCTGAGGCCATGTTTGCAGATCTTTGCCACTTTTCTGTCCGATCAGTTCAGCTTTCATTTGTTTTCCTTGTTTTGCCGTGCCTACTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGTCTTTTTTTCTTCTGTTCCGAGTGGTGCGTTCTGGCCAGTTTTTCTTATTGCCAACGTGGCTGCACTTATTGCTAGTCGGGCTATGACAACAGCAACATTTTCATGTATAAAGCAATCAACTGCACTTGGTTGTTTCCCTCGTCTTAAAATTATACATACTTCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTCCTCTTGGGGCTTTCCCTGGTGCTTGTCTGCACTATATCTAACATTGATGAGATTGGAAATGCCTACGGCATTGCTGAGCTCGGGGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTACTTATATGGCAGTTACACATCATCATAGTGCTTAGTTTCGTGGTAGTCTTCTTGGGATTGGAATTAACTTTTTTTTCATCTGTCCTGTGGAGTGTGACAGATGGAAGCTGGATTATATTGGTCTTTGCCATAATCATGTTTCTTATAATGTATATATGGAATTACGGAAGCAATCTCAAGTATGAAACTGAAGTCAAGCGAAAACTGTCAACAGATTTGATGAGAGAATTAGGTTGTAATCTTGGGACAATACGAGCTCCTGGGATTGGTTTGCTTTATAATGAGTTGGTCAAAGGAATACCGGCAATTTTTGGCCATTTTCTAACCACGCTTCCTGCAATACACTCTATGATCATATTTGTGAGTATCAAGTATGTTCCTGTTCCTATGGTACCGCAAAGTGAAAGGTTCCTTTTTCGGCGAGTCTGCCCCAAAAGCTACCATATATTTCGTTGTATTGCCAGGTATGGTTACAAAGATGTTCGGAAAGAAAATCACCAGACTTTTGAGCAGCTGCTGATTGAGAGCCTAGAGAAGTTTATTCGTCGTGAGGCTCAGGAGAGGTCATTGGAGAGTGATGGGGATGATGATTCTGATTCCGACGATGAGTACCCTCGTTCTAGGGTTCTCATAGGTCCCAATGGGAGTGTTTACTCACTTGGTGTTCCTCTTCTCGCTGATTATAAGGATACAAGCAACCCCGTTTTAGAAGCAAGCACATCAGAGGTGATAAGCTCCGTATCTCCTGACTCCAGTGTGTGTGACGCCGAGCAGAGCCTTGAGAGCGAGTTATCTTTTATTCACAAGGCTAAAGAATCTGGTGTTGTTTATCTTCTGGGTCACGGGGATATAAGAGCAAGGAAGGACTCGTGGTTTATCAAGAAGTTAGTTATAAACTATTTTTATGCTTTTTTGAGAAAGAACTGCAGAAGGGGAATCACGACTTTAAGTGTACCACACTCAAATCTTATGCAAGTCAGCATGACTTACATGGTATGA 2523 0.4296 MADEINRGTSVDSTESRWVFQDDDDDSDLENFDADLRFGRQAAVVDSDEEEDNAEQRLIRTGPRIDSFDVEALEVPGAHRSDYEDISVGKKVVLAIQTLGVVFGDVGTSPLYTFSVMFRKAPINGNEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSPELERSLKIKERLENSLTLKKILLILVLTGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIEKDEVVMISVACLVILFSVQKYGTSKVGLAVGPALFLWFCSLAGIGVYNLVKYDNSVLRAFNPIHIYYFFKRNSTKAWYSLGGCLLSATGSEAMFADLCHFSVRSVQLSFVFLVLPCLLLGYLGQAAYLMENHADAGQVFFSSVPSGAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVINWFLLGLSLVLVCTISNIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQLHIIIVLSFVVVFLGLELTFFSSVLWSVTDGSWIILVFAIIMFLIMYIWNYGSNLKYETEVKRKLSTDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSMIIFVSIKYVPVPMVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDSDSDDEYPRSRVLIGPNGSVYSLGVPLLADYKDTSNPVLEASTSEVISSVSPDSSVCDAEQSLESELSFIHKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRKNCRRGITTLSVPHSNLMQVSMTYMV* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1511 840 TIGRFAM kup: potassium uptake protein 94 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra10g1511 840 Pfam K+ potassium transporter 96 668 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra10g1511 840 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 18 839 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vra10g1511 840 PANTHER POTASSIUM TRANSPORTER 18 839 - -
Vra10g1511 840 MobiDBLite consensus disorder prediction 1 26 - -
Vra10g1511 840 MobiDBLite consensus disorder prediction 695 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1511 Vra-Chr10 19948619 19954337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1511 9 840 Inorganic Solute Cotransporters AT5G09400 79.097 0.0 1321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1511 - - gmx:100788008 1477.61