Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1489 ATGGAGAGCTTTGCACTGCATTCTCTCTCACCATCAACCTCAACCTCCTTCTCTCGCTTCTCCCAACTCCGTCATCGTCCTCGCTCCGTCATCTCCAGATCCCAATTCTCTCATGCCACTCCATCAGCTCTCCGATCACCCATCATCATCTCCCAACCTTTCTCCTTCCCTTCCAAACCCAAAGCCTTTAAATTCAACCCTTTTTCGAAACCCCATTACCCAATTCAAGCTTCTTCATCACCTCCTCCACCTTCAAAGTCATCACCACCAACACCAACACCTCTCCAGGGTGCAAAGCCCTTGCCTTTTGTGATCTCCGTAGGCATAGGCCTCATTGTTCGCTTCTTCGTCCCCAAACCGGTGGAAGTCACCCCCGAGGCCTGGCAACTCCTCTCCATTTTCCTCTCCACCATCGCGGGCCTTGTTCTCAGCCCGCTCCCCGTCGGTGCATGGGCCTTTCTGGGCCTCACGGCAACCGTCGTCACCAAGACTCTCACTTTCTCAGCAGCCTTCAGCGCCTTCACCAATGAGGTGATCTGGCTCATTGTCATTTCCTTCTTCTTTGCTCGTGGATTCGTGAAGACCGGACTTGGAGATAGGATTGCCACCTACTTCGTGAAGTGGATGGGAAAGAGCACTCTGGGCCTATCTTATGGGCTCACTTTCAGTGAAGTTCTGATTGCTCCTGCAATGCCTAGCACCACCGCCAGGGCTGGTGGGGTTTTCTTGCCCATTATCAAGTCACTCTCACTCTCAGCTGGCAGTGAACCCGACTCTCCCTCCGCTAAGAAACTCGGGGCTTACCTCGTTCAGAACCAATTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCTGCAGCTCAAAATCTGCTGTGTATCAAATTAGCAGAGGAGCTTGGGGTGATAGTTCCAAACCCTTGGGTCACTTGGTTTAAGGCAGCTAGTTTACCCGCACTTGTTTGTCTTCTTCTCACACCATTGATTTTGTACAAGCTCTACCCCCCCGAAATCAAGGACACTCCAGAGGCTCCTGCACTGGCTGCCAAGAAACTGGAAAGTATGGGCCCTGTTACAAAAAATGAATGGATTATGGTTGTCACAATGCTTCTTGCAGTGTCTCTGTGGATCTTTGGAGACACTATTGGCATAGCAAGTACTGTAGCTGCAATGATCGGTTTGTCAATACTTCTCCTAACAGGAGTTCTTAACTGGAATGACTGCTTGGATGAGAAATCGGCATGGGATACCTTAGCTTGGTTTGCCATTTTGGTCGGTATGGCAAGCCAGTTGACAAACCTTGGAATTGTGAATTGGATGTCTGACTGTGTGGCCAACAACCTTCGGTCGTTCTCTTTGACCTGGCCAGCCGCACTAGCTGTTCTTCAGGCAGCTTATTTCTTCATCCACTACCTTTTCGCTAGTCAGACTGGACATGTGGGGGCTTTATACTCTGCTTTCCTTGCCATGCATAGGGCAGCCGGTGTTCCTGGCATTCTGGCAGCACTTGCTTTAGGTTACAATACAAATCTTTTTGGTGCAATAACACACTATAGTAGTGGCCAGGCTGCTGTATACTATGGAGCTGGTTATGTAGACCTTCCGGATATCTTCAAAATGGGGTTCATCATGGCTGTTATTAATAGTATCATCTGGGGAGGTGTTGGTTCTTTGTGGTGGAAATTTTTGGGCTTGTACTGA 1704 0.493 MESFALHSLSPSTSTSFSRFSQLRHRPRSVISRSQFSHATPSALRSPIIISQPFSFPSKPKAFKFNPFSKPHYPIQASSSPPPPSKSSPPTPTPLQGAKPLPFVISVGIGLIVRFFVPKPVEVTPEAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTATVVTKTLTFSAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPDSPSAKKLGAYLVQNQFQSAGNSSALFLTAAAQNLLCIKLAEELGVIVPNPWVTWFKAASLPALVCLLLTPLILYKLYPPEIKDTPEAPALAAKKLESMGPVTKNEWIMVVTMLLAVSLWIFGDTIGIASTVAAMIGLSILLLTGVLNWNDCLDEKSAWDTLAWFAILVGMASQLTNLGIVNWMSDCVANNLRSFSLTWPAALAVLQAAYFFIHYLFASQTGHVGALYSAFLAMHRAAGVPGILAALALGYNTNLFGAITHYSSGQAAVYYGAGYVDLPDIFKMGFIMAVINSIIWGGVGSLWWKFLGLY* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1489 567 PANTHER DICARBOXYLIC ACID TRANSPORTER2 72 567 - -
Vra10g1489 567 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 72 567 IPR030676 -
Vra10g1489 567 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 119 561 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vra10g1489 567 Pfam Sodium:sulfate symporter transmembrane region 106 566 IPR001898 GO:0016020|GO:0022857|GO:0055085
Vra10g1489 567 MobiDBLite consensus disorder prediction 1 21 - -
Vra10g1489 567 MobiDBLite consensus disorder prediction 75 94 - -
Vra10g1489 567 MobiDBLite consensus disorder prediction 76 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1489 Vra-Chr10 19810245 19813829 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1489 1 567 Antiporters AT5G64290 72.504 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1489 - - gmx:100776794 944.11