Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1480 ATGGTTAAGGCTCATAGGTCTTGGCCTTACCCACAGCACGTGGCTTGGCCATCACCTTACTTTAATAGCCCTTGCACCTCAGCAGAGCCCAGTTCGCTGGTTCGCTCAACATACATGAACTCTAGCCCTTGCATCTTTCCTGCTGTCAGCTTATTTCCCGGGTTCACAGCTCCTGCTATCCCAGATTTGAAGAGTGAGAAGACCAAGGAAGTGCAAGGATTCCTTCAGCATCCCAGTTTGGAACCATGTCTGAATGGAACACATACTGGAGAGGCTATGCAAAATGCATCTTTGCAGAAGAAGTTGCTTGTGTTTGACCACTCTGGTAGTAAGACAAGGTTGCTTTATAGTCCTGTCTTCCCTTTTGTCCAGAGTCCAATTGTTACCGCTACCCAATTTACTCAAGTTTATGATGTAAACGAAGAAACACGAACAACTAATATAGGTCTAAAGCATTGGCCAGTGTACACTTCACCAGAAGAGACTGGTAAGGATCGTGTAGATAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCATTGCTTTATTCTGATGATTCTTATGATGATGATGATGGTGATGATGATGAGGTAACTAGTACAGGTCATTCTCCGTTGGTTACTGAAAAAACTTGTGTGACTCAAGAACAGTTTGTGGATATGAAGGAGGAAGTTGTTAGCACTGATTGGCCAAACAAAAGGCAGAAGTTAATTGATGGTGGATTCAATAGATTACCACCACTTGTGGAGAGTGCTAGTTCCGAAAGGCTAGATAAAACGTGTGAGTATGCCAGTGATGTTGAATCAAACTATTCTAGTAGTGGTGGGGTGTATGCTACAAGGCAAACTAAAGAGAAATCAACAGCTGCTGATATTCAATTGAAAAAGGATAAAATCCGTAGACTGGTGAGAGTTCTTGAGAACTTTATTCCAGGAGCAAAAGGAAAGCACCCCCTATTAGTCATCGATGGTACAATTGAGTACTTGGAATCTCTGATGTCCCAAACTGGTACACTGAAATATAACTAA 1038 0.42 MVKAHRSWPYPQHVAWPSPYFNSPCTSAEPSSLVRSTYMNSSPCIFPAVSLFPGFTAPAIPDLKSEKTKEVQGFLQHPSLEPCLNGTHTGEAMQNASLQKKLLVFDHSGSKTRLLYSPVFPFVQSPIVTATQFTQVYDVNEETRTTNIGLKHWPVYTSPEETGKDRVDNEESEMHEDTEEINALLYSDDSYDDDDGDDDEVTSTGHSPLVTEKTCVTQEQFVDMKEEVVSTDWPNKRQKLIDGGFNRLPPLVESASSERLDKTCEYASDVESNYSSSGGVYATRQTKEKSTAADIQLKKDKIRRLVRVLENFIPGAKGKHPLLVIDGTIEYLESLMSQTGTLKYN* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1480 345 PANTHER TRANSCRIPTION FACTOR BHLH145 7 344 IPR037546 -
Vra10g1480 345 MobiDBLite consensus disorder prediction 155 207 - -
Vra10g1480 345 PANTHER TRANSCRIPTION FACTOR SAC51 7 344 - -
Vra10g1480 345 MobiDBLite consensus disorder prediction 186 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1480 Vra-Chr10 19743905 19747506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1480 97 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G64340 40.816 6.72e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1480 - - gmx:100778385 516.153