Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1479 ATGGGAGTGGAGAAGCAATTGTTGAGGCCTGGCACCGGTCCCAAGCCACTTCCTGGTCAAAACGTCACCGTTCACTGCACTGGTTTCGGGAAGAACGGCGACCTCACTCAGAAATTTTGGAGCACAAAGGATCCCGGCCAAACCCCTTTCTCCTTCAAAATCGGACAAGGCTCTGTCATCAAAGGATGGGATGAAGGTGTGATTGGCATGCAAATTGGTGAAGTTGCTCGTCTCCGGTGCACTCCTGATTATGCTTATGGTGCTGGTGGCTTTCCTGCTTGGGGAATACAGCCCAACTCTGTTCTGGAATTTGAAATCGAAGTCCTAAGTGTGAATTGA 339 0.5015 MGVEKQLLRPGTGPKPLPGQNVTVHCTGFGKNGDLTQKFWSTKDPGQTPFSFKIGQGSVIKGWDEGVIGMQIGEVARLRCTPDYAYGAGGFPAWGIQPNSVLEFEIEVLSVN* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1479 112 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 19 112 IPR001179 GO:0003755
Vra10g1479 112 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 112 - -
Vra10g1479 112 Gene3D - 1 112 IPR046357 GO:0003755
Vra10g1479 112 MobiDBLite consensus disorder prediction 1 21 - -
Vra10g1479 112 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 15 109 IPR001179 GO:0003755
Vra10g1479 112 PANTHER PEPTIDYLPROLYL ISOMERASE 1 112 - -
Vra10g1479 112 SUPERFAMILY FKBP-like 2 111 - -
Vra10g1479 112 Coils Coil 109 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1479 Vra-Chr10 19738948 19740282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1479 2 110 Calmodulin-binding Proteins AT5G48570 41.818 2.71e-17 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1479 K01802 - gmx:100305505 225.328