Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra10g1424 | ATGTCTACAAAAATGAAGCCTACCTCAAGAAATTATTATCCTCTTGTTTTCTTTGGGTCATTATTCTGTCTCTTTATGGCCAGATTTGGTGCTGAAAGTGACATCTATTGCTTGCAAACCATCAAGAACATGGACACTTCTGATCTCTTATCTAGCTGGGATTTCGAGAGCAACACTGAGCGTGGCATATGCAGATTTAGCGGTGTTGAATGCGGCAACAACTATGTGGAAGATAGAGTAATCAGTCTATGGCTATCTAACATGGGGCTGAAAGGCCAGTTTCCTCGTTGCATCGAAGATTTCACATGGTTGCAGACTCTGATCCTCTCACACAACGAGCTTTCTGGATATATCCCAAACGATATATCAGCCAAGCTGCCATATCTGACCACACTTGATCTCTCAAATAACTATTTCTCTGGTGAAATTCCAAAGGGTATTGCCAATTTGTCAGGCTTAATTACCCTTCTACTTGATGGCAACCAGTTAACAGGCCAAATCCCACAAGATCTTGGGTTGCTTCCCAGGTTGAGAGATTTCAGTGTTGCAAATAACTTGTTGGAAGGGTCAGTGCCTGTTTTTGTGAGCAATCTTGATGTGAGTTTGAGCTATGCAAATAACAGTGGACTCTGTGGGGGAATACTAGGAAACTGTGATGAGAGCTTGTTTGGTAGATCGTTCTGGTATAGTTTTATTATTGGTTTTGCTTGCTCAGCTACTTCTGTTCTAGCATCTTTCATGTACTATTATGCACCTTGGACAGAATTCAAAAAGAGGAGGAGTAACGCTATTCATCCCCTAGTCAAGAAGCAGAATACTGAACAAGAACTGGTCTTTCATGAGCAAGGAAGCAAAGAGCTATCAATATTGTTGGAGAGATTTATTACTAGAATGAGCTTCGAGGGATTATGCAAGGCAACAGATTACTTTTGCATTGATAACGTGTTGGGGATAGGAAAGACAGGGATTATGTACAAGGCAAAGGTATCAAATAGCTGTTTTCTGGCAGTTAAGAGACTGTATGATGCTGATAAGTACAAGTGGAAATTCTTACTTGAAATAATGATTCCGGGAAGACATAGGCACAGAAACATAGTTCTACTGCATGGATTCTGCATACAGAAACATGAAAGGATTTTGGTGTATAAGTACATTTCTAATGGTCGACTCAGTGATTGGTTAGAATCTGACGAGGGACATCAACCAACAAAATTAGAATGGCCCGAGAGGATTCACATTGCACTTGGGATTGCAAGAGGTTTATCTTGGCTCCACAAAAGGTGCAACATAGTTCACCTCAATTTAGATTCAGAGTGTGTCTTGCTGGACAAGAACTTCGAGCCAAAAATTTCGAATTTTGGCAAGGCGAAATTCCTAAACCAGACTGTTGAAGATCATGTGAGGATGAAATTGTTTTTGGTTGATGGACTTGGAGTGAAGGGTAATGCTGAGAAGGATGTCTATGATTTTGGAATAATCCTTTTTGAGCTTTTAACGGGGAAAAGACTAAGTCCATCGACTGATTCTTCTGACAGTATTAATGGCCATATGATGAAGTATATCAGTAAGAACTTGTTCACTGATCCTGCTGACTTTTATGATGCCATTGACGATTCTATAATGGGGAAGGGTTTTGATGATAAAATCCTACGTCTTCTTGAAGTTGCATGTGACTGTGTTAAGACATCTCTAAAGCAAAGGCCAAAGATGATTGATATTCACCACACTCTAAGAGCTATGTGGGAGGGCTATAAACCCTGCTTTCATTATGAAAGTCTGAAACTGTCTATGGATTGTGCTGACTATATAAAGTGTATCAGCCAAATTGAATGTATTGAATAG | 1842 | 0.399 | MSTKMKPTSRNYYPLVFFGSLFCLFMARFGAESDIYCLQTIKNMDTSDLLSSWDFESNTERGICRFSGVECGNNYVEDRVISLWLSNMGLKGQFPRCIEDFTWLQTLILSHNELSGYIPNDISAKLPYLTTLDLSNNYFSGEIPKGIANLSGLITLLLDGNQLTGQIPQDLGLLPRLRDFSVANNLLEGSVPVFVSNLDVSLSYANNSGLCGGILGNCDESLFGRSFWYSFIIGFACSATSVLASFMYYYAPWTEFKKRRSNAIHPLVKKQNTEQELVFHEQGSKELSILLERFITRMSFEGLCKATDYFCIDNVLGIGKTGIMYKAKVSNSCFLAVKRLYDADKYKWKFLLEIMIPGRHRHRNIVLLHGFCIQKHERILVYKYISNGRLSDWLESDEGHQPTKLEWPERIHIALGIARGLSWLHKRCNIVHLNLDSECVLLDKNFEPKISNFGKAKFLNQTVEDHVRMKLFLVDGLGVKGNAEKDVYDFGIILFELLTGKRLSPSTDSSDSINGHMMKYISKNLFTDPADFYDAIDDSIMGKGFDDKILRLLEVACDCVKTSLKQRPKMIDIHHTLRAMWEGYKPCFHYESLKLSMDCADYIKCISQIECIE* | 614 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra10g1424 | 613 | Gene3D | Ribonuclease Inhibitor | 37 | 219 | IPR032675 | - | |
Vra10g1424 | 613 | SUPERFAMILY | Protein kinase-like (PK-like) | 287 | 586 | IPR011009 | - | |
Vra10g1424 | 613 | SUPERFAMILY | L domain-like | 61 | 222 | - | - | |
Vra10g1424 | 613 | Gene3D | Transferase(Phosphotransferase) domain 1 | 385 | 589 | - | - | |
Vra10g1424 | 613 | ProSiteProfiles | Protein kinase domain profile. | 310 | 577 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra10g1424 | 613 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 16 | 580 | - | - | |
Vra10g1424 | 613 | PANTHER | PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED | 16 | 580 | - | - | |
Vra10g1424 | 613 | Pfam | Protein kinase domain | 313 | 569 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vra10g1424 | 613 | Gene3D | Phosphorylase Kinase; domain 1 | 270 | 384 | - | - | |
Vra10g1424 | 613 | Pfam | Leucine rich repeat N-terminal domain | 32 | 71 | IPR013210 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra10g1424 | Vra-Chr10 | 19342215 | 19344583 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra10g1424 | 10 | 582 | Receptor kinase-like Gene Family | AT3G28450 | 34.286 | 9.20e-92 | 293 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-Xa | Vra10g1424 | Pkinase | 1.1e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra10g1424 | - | - | gmx:106795644 | 951.429 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vra7g1583 | 7 | 34140944 | 34153324 | Vra10g1424 | 10 | 19342215 | 19344583 | PCT |