Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1382 ATGGCTGACACCGCCGGCTCCGGTCACCGGCGGGTTATCACGCTCATCTCTTCCCTTATCTCCCTCTCTCTCTCCATCAGAGTCTTCGCCGGAAAGTGGCAACTAATTCGGAGTAGGCTGGAGGAGCTCTGTTCGGCATTCGTCGCCGGCGACTCCACTTCACTGTCAAGCGAGATCCCGGAGGTAACAGGCACGGTGGATGAGTGCCACGAGCTGGCGAGGCGGTGCTTGGATCTATCCTACAGCGGGAAGCTCTTGATGCAGAGCGACTTAGACGTGACTTTGGGGAAGTTGGAAGCGCACGTGAAGAAGCTATCAGAGATATTCAAGAAGCGTGTGTCGATGCATGGCTACGCTGTTGTGGTTTCACGGCCTGGTTTTGGAGCTTGCAAAGATGACATGAGGTTCTACTTAAGGGATTTAATGACTCGAATGAAGGTTGGTGATTTGGGTATCAGGAAGCAAGCGTTGATTAACCTGCATGAAGTTGTTGTGGAGGATGATAAGTATGTGAAATTGGTTGTTGAGGCTTCTGAGTTTGTTCACTTGTTGGTGGATTTTCTGGGTTGTGATGAGGTTGAGATTGTTGAGGAGGCGGCCAAGGTTGTTTCTGTTGTTGCGGGTTTTGATTATTATAAAGGGGTTTTGGTTGGTGCTGGAGTTATTGGTCCTTTAATTCGGATTTTGGAATGTGGGAGTGAAGGGGGAAAGATTGCTGCTGTGAGATGTTTGTGTAGACTGACTGAGAATTCGGATAATGCTTGGAGTGTTTCAGCTCATGGAGGTGTAACAGTCTTGTTGAGGATTTGTGAGAGCGGAGAGTGTAAAGGAGAATTGATTGGTCCTGCTTGTGGGGTGTTGCGGAATCTTTGTGGGGTTGAGGAAATCAAGAGGTTTATGGTTGAGGAGGGTGTGGTTTCCACGTTTGTGAAGCTTGTGAGGTCTAGGGATGAAATAGTTCAAGTTAGTTCTATTGAGTTGATTCAAAACATTGCCTCTGGTGATGAGTTGGTTAGGCAGATGGTGGTTAGAGAAGGAGGCGTTCGTGTTCTTCTGCGTGTTTTGGATCCATTGTGGACGTGCTCGTCTAAAACAAGAGAGGTTGTGATGAGGGCTATTGAGAATTTGTGTTTTTCTTCGTCCAGTTGTGTTAGTCTTTTGCTGAGTTATGGCTTTGTGGATCAGTTGATGTATTATGTTCGAAATGGGGAGGTATCGATTCAAGAGTTGGGGCTGAAGGTAGCGTTTAGATTGTGTGAAGCATCGGAGGAGGCCAAGAAGGCACTAGGTGATGCCGGCTTCATGGCCGAGCTTGTGAAGTTTCTAAATGCGGAATCGTTTGAAGTTCGTGAAATGGCAGCAGAGGCACTCTCTGGCATGGTTACGGTGGCTAAAAATAGGAAGAGGTTTGTGCAGGATGACCAAAACATTACCCTTCTTCTGCAATTGCTGGATCCAGGGGAGGGAAATTCTGGTAATAAAAAGTTGTTGATCTCTATCTTGATGTCACTAACAAGCTGCAACAGTGGCAGGAAGAAAATTGTGAGTTCCGGGTATGCCAAAAACATAGAGAGGCTTGCAGAAGCTGAGGTTTCTTCCGATGCCAAGAGGCTCGTCAGGAAGCTATCCACAAACCGGTTCCGCAGTATGTTGAGTGGAATCTGGCACTCTTGA 1674 0.4743 MADTAGSGHRRVITLISSLISLSLSIRVFAGKWQLIRSRLEELCSAFVAGDSTSLSSEIPEVTGTVDECHELARRCLDLSYSGKLLMQSDLDVTLGKLEAHVKKLSEIFKKRVSMHGYAVVVSRPGFGACKDDMRFYLRDLMTRMKVGDLGIRKQALINLHEVVVEDDKYVKLVVEASEFVHLLVDFLGCDEVEIVEEAAKVVSVVAGFDYYKGVLVGAGVIGPLIRILECGSEGGKIAAVRCLCRLTENSDNAWSVSAHGGVTVLLRICESGECKGELIGPACGVLRNLCGVEEIKRFMVEEGVVSTFVKLVRSRDEIVQVSSIELIQNIASGDELVRQMVVREGGVRVLLRVLDPLWTCSSKTREVVMRAIENLCFSSSSCVSLLLSYGFVDQLMYYVRNGEVSIQELGLKVAFRLCEASEEAKKALGDAGFMAELVKFLNAESFEVREMAAEALSGMVTVAKNRKRFVQDDQNITLLLQLLDPGEGNSGNKKLLISILMSLTSCNSGRKKIVSSGYAKNIERLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1382 557 Gene3D - 138 546 IPR011989 -
Vra10g1382 557 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 557 - -
Vra10g1382 557 SMART arm_5 422 462 IPR000225 GO:0005515
Vra10g1382 557 SMART arm_5 167 208 IPR000225 GO:0005515
Vra10g1382 557 SMART arm_5 335 378 IPR000225 GO:0005515
Vra10g1382 557 SMART arm_5 250 292 IPR000225 GO:0005515
Vra10g1382 557 SMART arm_5 293 333 IPR000225 GO:0005515
Vra10g1382 557 SMART arm_5 209 249 IPR000225 GO:0005515
Vra10g1382 557 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 261 305 IPR000225 GO:0005515
Vra10g1382 557 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 557 - -
Vra10g1382 557 SUPERFAMILY ARM repeat 139 539 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1382 Vra-Chr10 19083799 19085840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1382 109 409 U-box Gene Family AT2G23140 23.762 1.83e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1382 - - gmx:100783537 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1746 7 36301865 36305165 Vra10g1382 10 19083799 19085840 PCT