Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1376 ATGCAGACGAGGTACATGGAGAAATCCAGCAGCGCGGCGAGGGGGAAGCGCGGCTTAGATTCAGGCTCCACCGAAGAAGAACAACCTGAAAAAAAGCGACCTGCTCTTGCTAGCGTTATTGTTGAAGCCCTCAAGGTGGATAGTCTGCAGAAACTTTGTTCATCACTGGAGCCTATTCTTCGTAGAGTTGTTAGCGAAGAAGTAGAGTGTGCTTTAGCTAAATTAGTCCCTGCCAAGCTTAGTGGAAGGTATTACTTTGTCACTTCAAGGTCTTCTCCCAAGAGCATAGAAGGCCCTAATGGCAGCAGTCTACAGTTACAATTCAGGAACAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGACGGAGAGAATGGCAGCGCCATACACATTGTTTTGATTGATACAATAACAGGGCATGTTGTTACATCTGGCCCAGCTTCGTGTGTCAAACTAGATGTTATTGTACTTGAAGGAGATTTCAATAACGAGGATGATGATAATTGGAGCGAAGAAGATTTTGATAGTCACGTAGTTAAAGAGCGGGAAGGAAAAAGACCTCTTCTGGCTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACATTGGGCGAGCTTACATTTACAGACAACTCTAGTTGGATAAGGAGTAGGAAGTTCAGGCTGGGGCTCAAAGTTTCCTCAGATTGTTATGAGGGAATGCGTATTCGTGAAGCCAAATCAGAGGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAGCATTACCCACCTGCCTTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGAAAGGATGGTTCATTTCACAAAAGGTTAAATAAAGCAGGAGTATATACAGTTGAAGATGTCGTACGACTTGTGGTCAGAGATCCACAGAGATTGCGGAACATTCTCGGGAGTGGTATGTCAAATAAAATGTGGGATGTTCTTGTTGATCATGCAAAGACTTGCGTTCTCAGTGGAAAACTCTATGTATATTATCCCGATGGTGCAAGGAATGTTGGTGTTGTTTTCAATAACATCTATGAGTTGAGTGGTCTAATTACCAATGACCAATATTACTCTGCTGATTCTCTCTCCGACAGTCAAAAGGTTTATGTGGACACACTGGTGAAGAAGGCATACGAGAATTGGATGCATGTTATTGAGTATGATGGCAAGTCTCTGCTAAATGCCAATCAGAATATGACTTTGAGCACCTCCCAACCTCTGGCTGCAGGGGGTTCCCATGATTATTCAATTTCGAACTCCCTTGATCAGCAGACCTGCATCCCAAGTCTCCCAGTTCCTGTAACTACTGGGCAGCCTTCAATGGATCCAGCCATAGCAGTCGGAGGTTATCATAATGTGACGACTACCAGATCCTCAATGCAACCACAGAATGATAATCTTCATTCTTCTATTCCGTTTGCTAACACACTCCCACTGCAAAACCAGTTACTGAATGCTTCACACCAATCTCAACTTCCTAGAAATGAAAATGAGATGACTCATGGTTCACGACAGCCAGCTACTCCTGGCTTTCAAAGTGTCGGCATTTCAAATCCTAGTTATAGAGGATTTGAGGACTACTTTCCAGAGGAGGAGATTCGAACTAGAAGTCATGAGATGCTAGAAAATGAAGACATGCAGCATTTGCTTCGTATATTTAATATGGGAGGAGGGCAATCTCATGCTTCCTTCAATACCTCAGAAGATGCATACCCTTATCCATCATCTACTTACATGCCTGCGACCTCCATGAGCTACCACTTAGATGATGAACGAAACCGTTCCTCGGGAAAGGCTGTTGTTGGCTGGCTTAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTATTCGGAAGAGGGCCGCTGAGAGACGGGCACAACTTGTTGAGTTGGATGACCCGTAG 1929 0.4448 MQTRYMEKSSSAARGKRGLDSGSTEEEQPEKKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVECALAKLVPAKLSGRYYFVTSRSSPKSIEGPNGSSLQLQFRNRLSLPLFTGGKVDGENGSAIHIVLIDTITGHVVTSGPASCVKLDVIVLEGDFNNEDDDNWSEEDFDSHVVKEREGKRPLLAGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVSSDCYEGMRIREAKSEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDVVRLVVRDPQRLRNILGSGMSNKMWDVLVDHAKTCVLSGKLYVYYPDGARNVGVVFNNIYELSGLITNDQYYSADSLSDSQKVYVDTLVKKAYENWMHVIEYDGKSLLNANQNMTLSTSQPLAAGGSHDYSISNSLDQQTCIPSLPVPVTTGQPSMDPAIAVGGYHNVTTTRSSMQPQNDNLHSSIPFANTLPLQNQLLNASHQSQLPRNENEMTHGSRQPATPGFQSVGISNPSYRGFEDYFPEEEIRTRSHEMLENEDMQHLLRIFNMGGGQSHASFNTSEDAYPYPSSTYMPATSMSYHLDDERNRSSGKAVVGWLKLKAALRWGIFIRKRAAERRAQLVELDDP* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1376 642 Pfam Calmodulin binding protein-like N-terminal domain 104 251 IPR046831 -
Vra10g1376 642 MobiDBLite consensus disorder prediction 499 524 - -
Vra10g1376 642 MobiDBLite consensus disorder prediction 10 32 - -
Vra10g1376 642 PANTHER OS02G0177800 PROTEIN 1 640 IPR012416 GO:0005516
Vra10g1376 642 PANTHER CALMODULIN-BINDING PROTEIN 1 640 - -
Vra10g1376 642 MobiDBLite consensus disorder prediction 1 32 - -
Vra10g1376 642 Pfam Calmodulin binding protein central domain 263 329 IPR046830 -
Vra10g1376 642 Pfam Calmodulin binding protein C-terminal domain 334 396 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1376 Vra-Chr10 19029536 19035435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1376 14 637 Calmodulin-binding Proteins AT5G57580 58.833 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1376 - - gmx:100802994 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g1757 7 36504965 36510709 Vra10g1376 10 19029536 19035435 PCT