Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vra10g1330 | ATGTACATAGCTTCCATGGGAAGGTCTTTCAAGGACTCTCTGAAACTGCTTGAAGCTGATATTCACCATGCCAATACCCTGGCATCAGATTTTCCAAGGGAATATGACGGTGCATGCCTTCAAATGAGAATGTCATACAGTATGGCAGCACACCTATTTCTCTTTTTGGTACAATGGACAGATTGCAATCTTGCCGGGGCCCTAGGATTGTTAAGAATCCTAATATACAAGGTTTATGTAGATGGGACAACTACCATGTCTACACATGAAAGGAAAGCAAGTATTAGAGAATTCTATGCGGTCATATATCCCTCATTGTTGCAACTGCAAAAAGGTGTAACTGATACAGAGGATAAAAAACAGAAGGCTGTATGCTTGGAGAGGTATCGGAAAAGAGACGAAGATGAGCACAGACAGCCTTCGGATATAGACATTGAAAGGGAAGAGGAATGTGGAATATGCATGGAGATGAACAGTAAGATTGTGTTACCCGACTGCAACCATGTCATGTGCCTGAAATGTTACCACGAATGGAGAACAAGATCACAGTCATGCCCCTTTTGCCGCGACAGTCTGAAGAGAGTAAACTCAGGCGATCTCTGGGTGTTCACTGATGGTAGGGATGTTGTAGACATGGCAACAGTGACAAGAGAGAATCTTAAAAGGCTTTTCATGTACATAGACAAGTTGCCTTTGATCATTCCAGACTCTCTTTTTGACACTTATGACTCTCATCTAAGATGA | 744 | 0.4234 | MYIASMGRSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSMAAHLFLFLVQWTDCNLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDKKQKAVCLERYRKRDEDEHRQPSDIDIEREEECGICMEMNSKIVLPDCNHVMCLKCYHEWRTRSQSCPFCRDSLKRVNSGDLWVFTDGRDVVDMATVTRENLKRLFMYIDKLPLIIPDSLFDTYDSHLR* | 248 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vra10g1330 | 247 | PANTHER | PEROXISOME BIOGENESIS FACTOR 10-LIKE | 4 | 247 | - | - | |
Vra10g1330 | 247 | SMART | ring_2 | 151 | 188 | IPR001841 | - | |
Vra10g1330 | 247 | ProSiteProfiles | Zinc finger RING-type profile. | 151 | 189 | IPR001841 | - | |
Vra10g1330 | 247 | PANTHER | RING FINGER PROTEIN 41, 151 | 4 | 247 | - | - | |
Vra10g1330 | 247 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 107 | 213 | IPR013083 | - | |
Vra10g1330 | 247 | ProSitePatterns | Zinc finger RING-type signature. | 166 | 175 | IPR017907 | - | |
Vra10g1330 | 247 | Pfam | Zinc finger, C3HC4 type (RING finger) | 148 | 194 | - | - | |
Vra10g1330 | 247 | SUPERFAMILY | RING/U-box | 145 | 196 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vra10g1330 | Vra-Chr10 | 18637257 | 18642232 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vra10g1330 | 151 | 206 | C3H Transcription Factor Family | AT5G01960 | 39.286 | 1.83e-06 | 46.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vra10g1330 | K25840 | - | gmx:100789769 | 488.034 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vra7g1804 | 7 | 37265960 | 37269369 | Vra10g1330 | 10 | 18637257 | 18642232 | PCT |