Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1306 ATGGGAAAAGCCTTCGACGTGGGAGCCGTTCCGTTCAACTCCGACGGGTGGGGACCACCGGAAACAGCGGCCGCCGGCGGTAGCAGCAACCTTCCTCTCAACGTCCCCTTCGCCCCCTTCTCCCGTTCTGACAAATTGGGCCGCATCGCGGACTGGACCCGCAATTTCAACAACCCGACCCGCTCCAAGAACCCCGCTGATTCCGTCTTCGACTTCACCAACGATGACTCTTTCCCGGCCTCCGCTGATGACGACGCCTCATTCCGCCTCGTCGATGGCAAGCCTCCACCGCGCCCCAAATTCGGCCCTAAGTGGCGTTTCCAGCAGCAGCGTCAGCTTCCGCAGCGCCGCGACGAGGAGGTCGAAGCCCGAAAACGCGAACAGGAGAAGGAACGCGCACGTCGCGATAGGCTATACCACATGAACCGCTCAAACCCTAATGCGCCGCGCCGTGAAGCCGCTGTTTTCAAATCCTCTGTGGATATCCAACCGGAATGGAACATGCACGACCAGATCCCCTTCTCCACGTTCTCTAAACTGTCCTTCACCGTTCCCGAGCCTGAAGACCTTCTCCTCTGTGGTGCTCTCGAATACTACGATCGTACCTACGATCGCATCACACCCAAAAACGAACGCCGCCTGGAACGTTTCAAGAATCGGAACTTCTTCAAGGTCACCACTACTGACGACCCTGTTATACGCAGACTCGCGAACGAGGACAAAGCCACTGTTTTTGCCACCGACACCATTCTCTCCACTCTCATGTGTGCCCCAAGGTCTGTATATTCGTGGGATATTGTCGTTCAGCGCGTTGGGAACAAGCTTTTCTTTGATAAGCGTGATGGGTCGCAGCTTGATTTGCTTTCCGTTCACGAGACCTCTCAGGAGCCACTGCCTGAGGCTAAGGATGATATTAACTCTGCTCATTCGTTGAGCGTTGAGGCTGCCTATATTAACCAGAATTTCTCGCAGCAGGTTCTGATCAGGGATGGGAACAAGGTTATTTTTGATGAGGCTAATCCTTTTGCTAATGAGGGTGAGGAGGTTGCTTCTGTGGCTTATAGGTATAGGAGGTGGAAGCTTGATGATGATATGTATCTTGTTGCGAGGTGTGAGGTGCACAGTGTTGTTGATGTGAATAAGCAGCGGTCCTTCCTTACTTTGAATGCTTTAAATGAGTTTGATCCTAAGTATTCGGGTGTGGATTGGAGGCAGAAGTTGGAGACTCAGAGGGGTGCCGTGTTGGCCACTGAGCTTAAAAACAATGCGAATAAGTTGGCTAAGTGGACTGCTCAGGCTCTTTTGGCTAGCGCAGATATGATGAAGTTGGGGTATGTGTCTAGGATTCATCCCCGTGATCATTTTAATCATGTGATTTTGGCTGTGGTAGGGTACAAGCCCAGGGACTTTGCAGCACAGATCAATTTGAATACTGCTAATATGTGGGGTATTGTGAAGTCTATAGTTGATTTGTGCATGAAATTGAACGAGGGAAAATATGTCCTTGTGAAGGATCCGTCCAAGCCTCAAGTTAGGATTTATGAGGTTCCGGCTGATGCGTTTGAAAATGACTATGTGGAGGAGCCACTTCCGGAGGATGAGCAAGCTCAGCCTCCGGCGGAGGGTACTGAGGAGGCAGAAACTGGTACCACCAATGATGTGGAAGATAAGCAGATAGACGTTCAAGCTTGA 1692 0.5148 MGKAFDVGAVPFNSDGWGPPETAAAGGSSNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADSVFDFTNDDSFPASADDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREQEKERARRDRLYHMNRSNPNAPRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVIFDEANPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQAQPPAEGTEEAETGTTNDVEDKQIDVQA* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1306 563 MobiDBLite consensus disorder prediction 54 75 - -
Vra10g1306 563 MobiDBLite consensus disorder prediction 111 136 - -
Vra10g1306 563 PIRSF Transl_init_eIF3d 1 545 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vra10g1306 563 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 527 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vra10g1306 563 Coils Coil 116 136 - -
Vra10g1306 563 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 563 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vra10g1306 563 MobiDBLite consensus disorder prediction 1 32 - -
Vra10g1306 563 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 515 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vra10g1306 563 MobiDBLite consensus disorder prediction 54 136 - -
Vra10g1306 563 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT D 3 563 - -
Vra10g1306 563 MobiDBLite consensus disorder prediction 524 563 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1306 1 560 Eukaryotic Initiation Factors Gene Family AT4G20980 77.474 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1306 K03251 - gmx:100799613 1045.03