Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1270 ATGAAGAAAATTTCCAAGAGCAGCTGCAAGTCCGCATCACACAGGCTCTTTAAAGACAAGGCAAGGAACCATGTTGATGATCTACAGGTCATGTTCTTGGATCTGCAGTTTGCCAGAAAGGAGAGCCGAACGATTGATGTGGCACTCCTTGAGGAGCAACTCCATCAAATGCTTCGTGAGTGGAAGGCCGAGCTCAATGAGCCTTCTCCAGCTTCTTCTCTGCAACAAGGTGGTAGTCTTGGTTCATTCTCGACCGATGTCTATAGGCTATTGCAGCTCTGTGAGGAGGAAGATGATGCCACTAGTCCATTAGTTGCACCCAAGCCTGAACCTAATGATCAGACTATGCAGCCTGGAGCTAGGGTGATAGTCCAAGAGGGCCAGCATGAACAAGAATTTCTATTACTTAAAGAATGCAAACACTCCGCAGTAGGAGTTCCCAACATGGAAGCTAACAACTTGGACGGACCTGCTTTAGAACTTCATCAATTTGAATTCAATAAGGACTTGGATCACAGCTTTTATGCGGGTACAGGATTTTGTGAGGAAGGTGGTGTTCCTCATATATCTAGCTATCTTCCAAGGGCGTGTCCTCCTCCTTCTGCTTTCTTAGGTCCAAAATGCGCACTTTGGGACTGTCCAAGACCTGTTCAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTAAATGAAGGACCACCAGGCATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTCGCAGCTCTTAGTGCAAAGGCACACGGAAAAGTTGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAATCTCCATGGAATGCACCTGAACTCTTTGATATTTGTGTCCTGGAGGGTGAGACTATCAGGGAGTGGCTTTTCTTTGATAAACCTAGAAGGGCTTTTGAGAGTGGGAATAGAAAGCAGAGGTCACTGCCGGATTATAGCGGGCGTGGATGGCATGAATCTAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAGAGATCATATTACATGGACCCTCAACCTCTGAACCTTTTTGAGTGGCACCTTTACGAGTATGAAATCAGCATGTGTGATGCATGTGCGTTATATCGGTTAGAACTTAAGCTTGTTGATGGGAAAAAGAGCTCAAAGGCAAAGATAATAACAGGTGATTCGGTTGTTGATCTGCAGAAGCACATGGGAAGCCTCTCTGCTGAGTTTCATTCCGATAGTAACAAACGGTCTGCCAAAGGAACAACAAGACAAGGGGGTTTTTTTTCCTTGTCAAAACATTGTGAATAG 1332 0.455 MKKISKSSCKSASHRLFKDKARNHVDDLQVMFLDLQFARKESRTIDVALLEEQLHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVAPKPEPNDQTMQPGARVIVQEGQHEQEFLLLKECKHSAVGVPNMEANNLDGPALELHQFEFNKDLDHSFYAGTGFCEEGGVPHISSYLPRACPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAHGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISMCDACALYRLELKLVDGKKSSKAKIITGDSVVDLQKHMGSLSAEFHSDSNKRSAKGTTRQGGFFSLSKHCE* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1270 443 PANTHER TRANSCRIPTION FACTOR VOZ1 1 431 IPR039277 GO:0006355|GO:0048578
Vra10g1270 443 PANTHER TRANSCRIPTION FACTOR VOZ1 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1270 Vra-Chr10 18112551 18116137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1270 3 417 VOZ-9 Transcription Factor Family AT1G28520 71.429 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vra10g1270 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1270 - - gmx:100820163 777.319