Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1259 ATGGGAACTTGTGATACACACTTTTTTCTTTCTCTTATGCACATTTTCATTCCATGCTTGCTATGTATCATGGCCAAAGTTGAAGCTTTAAACGTAACAATCTCAGGATTTTATGTGTTTGGAGACTCCACGGTTGATCCTGGAAACAATAACTACATCAAGACACCTTTCAAGAGCAATTTTCCACCTTATGGATTGGATTTTTCCAACCAGGTTCCAACAGGGAGATTTACCAATGGGAAGCTTGCCACTGATTACATCGTTTCATACACAGGTCTCAAGAAAGAGCTTCTTCCACCTTATCTGGATCCAAGCCTCACCAATGTTGAAGAGCTAATGACAGGAGTCAGTTTTGCCTCTGCCGGTTCTGGCTTTGACCCACTTACACCAACCATCACTAATGTAATTTCAATAGAAAAGCAGTTGGAATATTTCAGAGAATGCAAAAAGAGGATGGAGGATGCGATGGGTAAGCAAAGAATTGAAGATCATGTGAAGAAGGCTGCGTACTTCATCAGTGCTGGTACAAATGACTTCGTTCTTAATTATTTTTCTCTACCAGTACGAAGAAAGAGCTACACTCTCCAAGCGTATCAAAACTTCTTAATCCAACGCATCACAGATTTTATACAGAATTTGTTGGCAGAAGGTGGTAGAAAGATTGTAGTAGCTGGAATACCTCCAATGGGATGTCTACCGTTGATGATCACGATGAATTCTCCTGATGCCTTATTCCAACGTGATTGCATTGAGAAATACTCTTCTATTGCAAGAGATTACAATCTGCTCCTTCAACAAGAATTACGCAAAATGCAATTGCACCTTATAAATTCCTCTGCTTCGAATGCTAAGATATATTATGTTGACATATATAAACCCATTGCGGATATGATTCAATCTCGTGACAGATTTGGATTTGAAGACGTTGACAGTGGATGCTGTGGAAGTGGGTTGATTGAAGCATCGATATTGTGTAATAAGATTTCAGATGTGTGTGTTGATCCATCAAAGTACGTATTCTGGGATTCAATTCACCCAACTCAGAAGGCATATCACAACGTCTTCTTGGCCAGCATCTCTACCATTGACTTCATCATCAATAACTAG 1107 0.3957 MGTCDTHFFLSLMHIFIPCLLCIMAKVEALNVTISGFYVFGDSTVDPGNNNYIKTPFKSNFPPYGLDFSNQVPTGRFTNGKLATDYIVSYTGLKKELLPPYLDPSLTNVEELMTGVSFASAGSGFDPLTPTITNVISIEKQLEYFRECKKRMEDAMGKQRIEDHVKKAAYFISAGTNDFVLNYFSLPVRRKSYTLQAYQNFLIQRITDFIQNLLAEGGRKIVVAGIPPMGCLPLMITMNSPDALFQRDCIEKYSSIARDYNLLLQQELRKMQLHLINSSASNAKIYYVDIYKPIADMIQSRDRFGFEDVDSGCCGSGLIEASILCNKISDVCVDPSKYVFWDSIHPTQKAYHNVFLASISTIDFIINN* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1259 368 Gene3D SGNH hydrolase 26 363 IPR036514 -
Vra10g1259 368 CDD SGNH_plant_lipase_like 37 360 IPR035669 -
Vra10g1259 368 PANTHER GDSL ESTERASE/LIPASE EXL3 7 365 - -
Vra10g1259 368 Pfam GDSL-like Lipase/Acylhydrolase 38 355 IPR001087 GO:0016788
Vra10g1259 368 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 7 365 - -
Vra10g1259 368 SUPERFAMILY SGNH hydrolase 166 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1259 Vra-Chr10 18039307 18044661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1259 8 352 Pollen Coat Proteome AT1G75930 34.870 1.48e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1259 - - gmx:100788326 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g1259 10 18039307 18044661 Vra10g1259 10 18039307 18044661 ECH