Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1250 ATGTTCATTTTGGACATATTCCCCGTTGGTTTTCCAGAGGGCTTATCCTATTTTGAAATAAGTTACTTCACATCAAGAATGGGTTCAGGCTATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAACAAGGCAGATCAAAGAAAGCAAAGGGTATCTTAGCTCAAGAGAAACTAAATGCATCAAAGTCAAACAATTATACCGGGAAAGAGTCTAGTGATTTAGCAAATGGTATTAAAAGTGAAAACCTTGTCTCACCTGGGGTGTCAGTTGAAACTATTGCTGCAACAAGGATCCAGACTGCATTCCGAGCTTATAAGGCTAGAAAGGCTTTACGGCGCGTGAAAGGATTTTCAAAACTGAAGATCTTAACAGAGGGTTTCTCTGTTAAAAAGCAAGCCAGTACAGCTATAACATACCTTCACTCATGGAGCAAGATTCAAGCCGAGATCAGAGATCGTCGAATATGTATGGTAACAGAAGACAGGATCAGGAGGAAGAAACTAGAGTCTCAACTAAAACTGGAAGCAAAGCTTCATGATCTGGAGGTTGAATGGTCTGGTGGTTCTGCAACCATGGAGGAAATCCTTGGAAAGATACATCAGAGGGAAGAAGCGGCAGTTAAACGCGAAAGAGCCATGGCATATGCCTTTTCCCATCAGTGGAGGGCCAACTCTAGTCAGAGCCAACTGCTAGGTAGTTATGAACTTAGCAAGGCTAATTGGGGTTGGAGCTGGAAGGAACGGTGGGTTGCTGCTCGGCCTTGGGAAAGCCGCATCTCTGGCTTATCTGTCACCCCAGAGAAAACTCACCATAAGCAGCCAAGTAAGGTTCAGAAGGATAAGAACACACCACCAAAAACTCCTGTACCAGTTAAACCTTCTTTAGCCATTGCAAAAGGGACTCCTCCTTCTTCCAATGCAAAAGGCAATTCAAAAGCTAGGAGATTGTCTTATCCACCGACTGCCGAGAAAACTGTGGTTCAAGAAGTGCAATGA 999 0.4304 MFILDIFPVGFPEGLSYFEISYFTSRMGSGYWFKTIISLRKSKQGRSKKAKGILAQEKLNASKSNNYTGKESSDLANGIKSENLVSPGVSVETIAATRIQTAFRAYKARKALRRVKGFSKLKILTEGFSVKKQASTAITYLHSWSKIQAEIRDRRICMVTEDRIRRKKLESQLKLEAKLHDLEVEWSGGSATMEEILGKIHQREEAAVKRERAMAYAFSHQWRANSSQSQLLGSYELSKANWGWSWKERWVAARPWESRISGLSVTPEKTHHKQPSKVQKDKNTPPKTPVPVKPSLAIAKGTPPSSNAKGNSKARRLSYPPTAEKTVVQEVQ* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1250 332 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
Vra10g1250 332 PANTHER IQ-DOMAIN 9 27 323 - -
Vra10g1250 332 MobiDBLite consensus disorder prediction 263 332 - -
Vra10g1250 332 PANTHER IQ-DOMAIN 5-RELATED 27 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1250 Vra-Chr10 17980812 17985265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1250 27 320 IQD Protein Family AT2G33990 52.041 1.24e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1250 - - vun:114186748 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g1250 10 17980812 17985265 Vra10g1250 10 17980812 17985265 ECH