Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1237 ATGAATGGGGAAGATAGAATTCCAATGAGGCCAGTTATGATTATAGTGATAGCATTCGTGCTTATAACCTCTTCAAAATCAGAATCATGCCCTTACTCTTCCATATTCAGCTTCGGTGATTCCCTCGCCGACACCGGCAACCTCTATCTCAGCTCATCACCGCTTTCCGACAACTGCTTCTTCCCTCCTTACGGTGAAACCTTCTTTCACAATGTCACAGGACGCTGCTCCGATGGTCGTCTCATCATCTTTCTTGTGGGTGAAATAGGTGGAAACGATTTCAATCATCCTTTGGTTGNAGGAAAGAGCATAGCAGAAGTTAAATCGTATGTGCCTAATGTCATCGATACAATATCTTCAACAACCAAAGAGTTAATTGGTTTAGGGGCTCACACGCTCATAATTCCTGGGAATTTTCCTATTGGATGTAGTGCAAATTATTTAACAATTTATGAAACCAAAGAGGAGAAGCAATATGACAAATTTGGATGTTTGAAGTGGTTAAACGAGTTTACTGAATATTACAACCATAAGCTCCAAATTGAATTGAATAAGCTTCGAGCTCTTCATCGTCATGTTAATATTATCTATGTTGATTATTACAATGCTGCAATGACTTTATATCGTCATCCTGCAAAATTTGGATTTATTGGTCTTAAAGCCTGTTGTGGAAAGGGAGGTCCATACAATTTCAATGAATCAATGAAGTGTGGGGATCCAGGCGTGAATGCTTGTGATGATCCTTCCAAGTATATTGGATGGGATGGGAAACATTTAACTGAAGCTGCTTATAAATTAATCGTTCAAGCTTTTATAAAAGGGCCATATTCTCTCCCTCAGTTTAGTTCATCGTGTTTAACTAATGCAAATTTTGGTTATACACGTACCTTTAAGTATTAA 900 0.3833 MNGEDRIPMRPVMIIVIAFVLITSSKSESCPYSSIFSFGDSLADTGNLYLSSSPLSDNCFFPPYGETFFHNVTGRCSDGRLIIFLVGEIGGNDFNHPLVXGKSIAEVKSYVPNVIDTISSTTKELIGLGAHTLIIPGNFPIGCSANYLTIYETKEEKQYDKFGCLKWLNEFTEYYNHKLQIELNKLRALHRHVNIIYVDYYNAAMTLYRHPAKFGFIGLKACCGKGGPYNFNESMKCGDPGVNACDDPSKYIGWDGKHLTEAAYKLIVQAFIKGPYSLPQFSSSCLTNANFGYTRTFKY* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1237 299 Pfam GDSL-like Lipase/Acylhydrolase 88 271 IPR001087 GO:0016788
Vra10g1237 299 PANTHER - 83 288 - -
Vra10g1237 299 PANTHER - 11 83 - -
Vra10g1237 299 Gene3D SGNH hydrolase 22 85 IPR036514 -
Vra10g1237 299 Gene3D SGNH hydrolase 86 274 IPR036514 -
Vra10g1237 299 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 11 83 - -
Vra10g1237 299 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 83 288 - -
Vra10g1237 299 SUPERFAMILY SGNH hydrolase 35 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1237 Vra-Chr10 17902830 17906494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1237 83 272 Pollen Coat Proteome AT1G75930 26.263 1.42e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1237 - - vra:106774955 625.55