Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1207 ATGCACCCAATTACCCCTCCACACTGTTACCTTGCGTGTCCTCCTCTCCTCTCTCCATCTGGTCACCTCACCCCACCTCTCCCACCTTATAAACACCCCTTCTCCCCTCCTTACATACACACATTCACTCTTTCTCTATTCACCTCTTCACTCGCTCACTCACTTTTCTTTCTAATGGCCAACCCTGGAGTGGAAAGATTCCCTGAGTTCTACGAGAAGTGGACTGCCAAGCTTGAGGATATTCTCCAAAAGCTTATGCAGGTGTCCAACCAGAGAACCGAGGTGGTCAAGACTCAGCAAGAGCTGCAAGCTTTGGTGTCAACAGTCACAACCCATTTGAAGTTATACTACACTACCAAATGGGCTGCTGCACATGGAAACGTTCTGATTTTCTTTTCTCCGCCCTGGCTGAACCCTTTGGAGCATGCTCAGCTTTGGTTGTCGGGGTGGAAGCCGTCCACGGTGTTCAGGCAGGTGGAGAATCTGAAAAACAGGAATGTTTTGGTGCTGACGGAGGAGCAGAATAAGAAGATAGAGGAGCTGAAGATGAGGGTGAAGATGGAGGAGGAGAAGGTGGAGAGGGAGATGGAGAGGCAGCAGGTGGCCATGGCGGACCGCAAGATGGTGCAGTTGGCCAAAATCACTGGCCGCGCAAGTGCCAATGGTTCGGCGGGTGCTGTTGCCGAAGTGGCAGTGAAGGAGGTTGTTGAAGGGTTAGAGAAGGTCATGAAGGCTTCCGATTGCGTGAGGCTCAAGACACTCAAAGGGGTGTTGGATTTGCTTAGTCCAATGCAGAGTGTGGACTTCCTGGCTGCGAATATAACTACGCAGCTGCGATTCAAGAAATGGGGGACGAAGAAGAAGGACACCGCTGGGCCGGTGCTCAATGTGAATCAAGACAAGTGA 906 0.5143 MHPITPPHCYLACPPLLSPSGHLTPPLPPYKHPFSPPYIHTFTLSLFTSSLAHSLFFLMANPGVERFPEFYEKWTAKLEDILQKLMQVSNQRTEVVKTQQELQALVSTVTTHLKLYYTTKWAAAHGNVLIFFSPPWLNPLEHAQLWLSGWKPSTVFRQVENLKNRNVLVLTEEQNKKIEELKMRVKMEEEKVEREMERQQVAMADRKMVQLAKITGRASANGSAGAVAEVAVKEVVEGLEKVMKASDCVRLKTLKGVLDLLSPMQSVDFLAANITTQLRFKKWGTKKKDTAGPVLNVNQDK* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1207 301 Coils Coil 71 91 - -
Vra10g1207 301 PANTHER - 59 290 - -
Vra10g1207 301 Pfam Seed dormancy control 84 159 IPR025422 GO:0006351|GO:0043565
Vra10g1207 301 PANTHER PROTEIN DOG1-LIKE 4 59 290 - -
Vra10g1207 301 Coils Coil 171 207 - -
Vra10g1207 301 ProSiteProfiles DOG1 domain profile. 64 290 IPR025422 GO:0006351|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1207 52 279 bZIP Transcription Factor Family AT5G06960 26.522 7.80e-12 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1207 - - pvu:PHAVU_006G175000g 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g1207 10 17674972 17676121 Vra10g1207 10 17674972 17676121 ECH