Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1148 ATGGCAATTAAGAGAGTTAATTCAGTAACTTACTTCTTACTATTTCTCCACTTTCTCCTTCCCTTCTTCGCCTCATGCAGCAACAGGAAGCAGGTTTACGTAGTTGAGTTGTTCGGAGATCTCAGCAATAGTGATAAAACAGATGAATTTGAGAATGTCCATCATGCTTTTTTGCTTTCCGTTAAAGAAACTGAGGAGGAAGCACGAGCTTCCCTTCTTTATAGTTACAAACACAGTATCAATGGTTTTGCAGCATTGCTTACTCCAAAAGAAGCCAATGACATCTCAGAAATGGAGGGAGTGGTTTCTGTGCATAAGAACCAGCCAAGAATCTACTCTTTGCACACCACCAGATCATGGGAATTCGTGGGATTGAATACACCTTTGAATCCATGGGAAGAAGACTCAAATCAGAAAAATAGAGACTTGCGAAGCAGAGCACAATATGGGAAAGATATCATAGTAGGAATGATTGATAGTGGTGTGTGGCCAGACTCAAGGAGCTTCAGTGATGAAGGGATGGAGCCTGTTCCAACAAAATGGAAAGGAGAATGCCAAAATGGAACTGCTTTCGATTCATCGCAATGTAATAGGAAGATTATAGGAGCTCGTTACTACTTGCGTGGTTACGAAAGTGCATTTGGTCCTCTAAACGAAAAAGAGGACTACAAATCAGCACGTGATAAAGATGGTCATGGAACACACACAGCTTCAATAGTTGCAGGGCGTGCAGTGGCTAATGCCTCAGCCCTTGGAGGCTATGCCAAGGGCACAGCCCTAGGTGGGGCCCCTTTGGCCCGTCTTGCCATATACAAAGCATGTTGGGCCATTAAGGGACAGTCCAAAGACCAAGGGAACGTATGCACAAACATTGACATGCTCAAAGCCATAGATGATGCCATTGGTGATGGCGTTGATGTTCTAAGCATTTCCATTGGGTTCAAAGAACCCCTTTCTTATGAGGAGGATGTGATTGCCAGGGGTGCATTGCATGCTGTGAGGAAAAACATTGTCGTAGTGTGCAGTGCAGGTAACTCTGGCCCTTCACCTCAAACTTTGTCAAATCCTGCACCATGGATCATCACTGTTGGTGCCAGCACTGTGGATCGCTCTTTTCTTGCTCCTGTTAAGCTCACCAATGGTACAGTCATTGAGGGTCGATCAATTGCCCCAGTTCACATGGGAAACAACTATTACCCATTGGTTCTAGCTAAAGATGTTGAACTTCCAGGCCTGCCTAGTAATAATTCTGGGTATTGCTTGGACAATAGCCTTGAACCTAACAGGACAATGGGGAAGATAGTTATCTGCCTCAGAGGGCAAGGTGGAAGGTTAAAAAAAGGCTTAGAAGTTCAAAGGGCTGGGGGGATTGGTCTTATCCTTGGGAACAATAAACTATATGGAAATGATGTACCCTCTGATCCTCATTTTATTCCGGCCACTGGACTGTCCTATGATAATGTCTTAAAACTCATTCACTATGTCCATTCTACCCCAAATCCAATGGCACAAATTCTGCCAGGAACAACAGTGTTAGAAACCAAACCAGCACCCTACATGGCCTCTTTCTCTAGCAGGGGTCCAAATATAATTGACCCCAATATTCTCAAGCCTGATATTACAGCCCCAGGAGTAGATATATTAGCAGCATGGACCGCGGAAGATGGTCCCACACGAATGACATTTAACGACAAACGAGTGGTTAAGTACAACATTTTCTCTGGAACTTCAATGTCATGCCCCCATGTTGCTGCAGCAGCTGTTCTTCTCAAAGCCATACACCCTACATGGACCACTGCTGCTATAAGATCTGCCCTCATGACTACAGCCATGCCAACGGACAACACTGGCCATCCATTGATTGATGAAGCTGGAAATCTTGCAACTCCTTTTGCAATGGGATCGGGCCACTTCAACCCCAAAAGAGCAGCACATCCTGGTCTAGTTTATGATGCCTCCTACATGGACTACCTTCTTTACACTTGTAAACTTGGAGTAGCTAAAAAACTCAACATTACATATTGTCCAAAGTCATTTGTTGAACACTTTGAACTCAACTATCCATCCATACAAATCCATGGACTCAATTATTCTAGGACTATTAAGAGGACAGTCACCAATGTTGGTAGAAGAAGGAGTATTTACAAGTTTAGTGCCTCGTCACCAAAGGAATTCAACATCACAGCCACTCCAGATACTCTTACATTTAATCATGTTGGGCAGAAAATGAACTTCATCATCACAGTGACAGCAAACTTGAGTCAGATACCAACCAACCATGGCCCAGATAAGTACTACTTTGGTTGGTATGCATGGACTCGAAAACATATCGTTGTAAGAAGCCCCGTGGCAGTGTCTTTTATATAG 2367 0.4381 MAIKRVNSVTYFLLFLHFLLPFFASCSNRKQVYVVELFGDLSNSDKTDEFENVHHAFLLSVKETEEEARASLLYSYKHSINGFAALLTPKEANDISEMEGVVSVHKNQPRIYSLHTTRSWEFVGLNTPLNPWEEDSNQKNRDLRSRAQYGKDIIVGMIDSGVWPDSRSFSDEGMEPVPTKWKGECQNGTAFDSSQCNRKIIGARYYLRGYESAFGPLNEKEDYKSARDKDGHGTHTASIVAGRAVANASALGGYAKGTALGGAPLARLAIYKACWAIKGQSKDQGNVCTNIDMLKAIDDAIGDGVDVLSISIGFKEPLSYEEDVIARGALHAVRKNIVVVCSAGNSGPSPQTLSNPAPWIITVGASTVDRSFLAPVKLTNGTVIEGRSIAPVHMGNNYYPLVLAKDVELPGLPSNNSGYCLDNSLEPNRTMGKIVICLRGQGGRLKKGLEVQRAGGIGLILGNNKLYGNDVPSDPHFIPATGLSYDNVLKLIHYVHSTPNPMAQILPGTTVLETKPAPYMASFSSRGPNIIDPNILKPDITAPGVDILAAWTAEDGPTRMTFNDKRVVKYNIFSGTSMSCPHVAAAAVLLKAIHPTWTTAAIRSALMTTAMPTDNTGHPLIDEAGNLATPFAMGSGHFNPKRAAHPGLVYDASYMDYLLYTCKLGVAKKLNITYCPKSFVEHFELNYPSIQIHGLNYSRTIKRTVTNVGRRRSIYKFSASSPKEFNITATPDTLTFNHVGQKMNFIITVTANLSQIPTNHGPDKYYFGWYAWTRKHIVVRSPVAVSFI* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1148 788 Pfam PA domain 420 490 IPR003137 -
Vra10g1148 788 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 115 IPR037045 -
Vra10g1148 788 CDD Peptidases_S8_3 112 610 IPR034197 -
Vra10g1148 788 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 785 IPR045051 -
Vra10g1148 788 ProSiteProfiles Serine proteases, subtilase domain profile. 131 644 - -
Vra10g1148 788 Pfam Peptidase inhibitor I9 32 110 IPR010259 -
Vra10g1148 788 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.6 25 785 - -
Vra10g1148 788 Gene3D Peptidase S8/S53 domain 152 657 IPR036852 GO:0004252|GO:0006508
Vra10g1148 788 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vra10g1148 788 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Vra10g1148 788 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Vra10g1148 788 PRINTS Subtilisin serine protease family (S8) signature 574 590 IPR015500 -
Vra10g1148 788 Pfam Subtilase family 150 618 IPR000209 GO:0006508|GO:0008236
Vra10g1148 788 Gene3D - 369 512 - -
Vra10g1148 788 SUPERFAMILY Subtilisin-like 143 648 IPR036852 GO:0004252|GO:0006508
Vra10g1148 788 Pfam Fibronectin type-III domain 684 785 IPR041469 -
Vra10g1148 788 ProSitePatterns Serine proteases, subtilase family, serine active site. 575 585 IPR023828 -
Vra10g1148 788 CDD PA_subtilisin_like 376 505 - -
Vra10g1148 788 Gene3D - 660 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1148 Vra-Chr10 17160878 17167197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1148 24 787 Subtilisin-like Serine Gene Family AT5G45650 55.000 0.0 836
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1148 - - gmx:100793064 1345.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g1148 10 17160878 17167197 Vra10g1148 10 17160878 17167197 ECH