Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1144 ATGGTTGTGGAAGATTCACAAAAATCAACTATCACCGATGACCAAAACCCTAGCAGGGTCGACAACGACGACGACGATCTCGAAGATGGGGAGATCCTCGAAGATGCCGACGACGCTGCCTCCGCTGCCTCCAAGCCTCCGTCCGCACTCCTCCGCAACCCCCACCCTCTCGAGAATTCCTGGACCTTCTGGTTCGACAGCCCTTCTGCCAAGTCCAAACAAGCCGCATGGGGCAGTTCCATCCGACCCATATACACCTTCGCCACCGTCGAAGAGTTTTGGAGCATTTACAATAACATTCACCACCCGAGCAAGTTGGGTGTGTGGGCAGACTTTCACTGCTTCAAGTATAAGATCGAGCCTAAATGGGAGGACCCTATCTGCGCGAATGGTGGAAAATGGACCATGACTTTTCAAAGAGGAAAATCTGATACTAGTTGGCTATATACGTTGTTGGCAATGATTGGAGAACAGTTTGATCACGGAGATGAAATTTGTGGAGCTGTCGTGAATGTCAGAAGTAGGCAAGATAAAATTTCTATTTGGACTAAGAATGCTTCGAATGAAGCTGCTCAGATGAGCATTGGAAAGCAGTGGAAGGAGTTTCTTGATTACAATGAGACAATAGGCTTTATATTTCATGAGGATGCAAAGAAGCATGAGAGGAGTGCTAAAAATAAATACGTGATATGA 693 0.469 MVVEDSQKSTITDDQNPSRVDNDDDDLEDGEILEDADDAASAASKPPSALLRNPHPLENSWTFWFDSPSAKSKQAAWGSSIRPIYTFATVEEFWSIYNNIHHPSKLGVWADFHCFKYKIEPKWEDPICANGGKWTMTFQRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRSRQDKISIWTKNASNEAAQMSIGKQWKEFLDYNETIGFIFHEDAKKHERSAKNKYVI* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1144 230 Pfam Eukaryotic initiation factor 4E 56 208 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vra10g1144 230 SUPERFAMILY eIF4e-like 51 226 IPR023398 -
Vra10g1144 230 MobiDBLite consensus disorder prediction 1 53 - -
Vra10g1144 230 MobiDBLite consensus disorder prediction 1 16 - -
Vra10g1144 230 Gene3D RNA Cap, Translation Initiation Factor Eif4e 48 230 IPR023398 -
Vra10g1144 230 ProSitePatterns Eukaryotic initiation factor 4E signature. 111 134 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vra10g1144 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 1 230 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vra10g1144 230 MobiDBLite consensus disorder prediction 19 36 - -
Vra10g1144 230 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-1 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1144 Vra-Chr10 17132005 17134109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1144 1 229 Eukaryotic Initiation Factors Gene Family AT4G18040 62.449 2.56e-110 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1144 K03259 - gmx:100793288 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g1144 10 17132005 17134109 Vra10g1144 10 17132005 17134109 ECH