Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1138 ATGGAAATGCTCGAAAGGGAAACACCATTAAAAATGGTTAACTTCAGTGCAAGTTACAGTAATTACAGTTTCATGTGTTACGGCCTTCTACTTCTCCTTCTTTTATCACTGTTCTTCTTTCAATTTGCATGGTGTGGCTCCACGGTTAAGTTCCTTCCTGGATTCGAGGGACCCCTTCCTTTCGTCCTTGAAACCGGATATGTGGGAGTGGGTGAATCTGAGGATGTGCAGGCATTCTACTATTTTATTGAGTCAGAAAACAATCCAAAGGAGGATCCTCTCATGCTTTGGCTCACTGGTGGCCCTGGTTGCTCAGCCCTCTCTGGCCTTGTCTTAGAAATAGGTCCTCTTGGTTTTAAGTATGAGGAATATGATGGAATCCTCCCAAATTTGTTCTATAGGCAACACTCATGGACTAAGGTGAGTAGCATTATATTTGTAGACTTGCCAGTTTTCACTGGATTCACTTATGCCACGACAGAGTCTGCTGCTCAACGAAGTGACTGGATACTTGTTCACCAGCTCCATCAATTTCTAAGGAAGTGGCTGATTGATCATCCAACTTTTTTGTCAAACCAAGTTTACATTGGCGGCGATTCTTACTCTGGCATTCCTATTCCAGTGATTGTTCAAGAAATTTCACAAGCAAATGAAAAAGGGGTACAACCATGGATAAATCTCCAGGGATACCTGTTAGGGAATGCTGCTACTACTGGAAGTGAATATAATTATCGAATTCCTTTTTCTCATGGAATGGGACTTATTTCCGATGAACTGTATGAGTCACTACAAAAAAATTGCAAAGGAGAGTACACAAAAGTAGACGAAAAAAATGTATTATGTTCTAGAGATATGGAGTCATTCAACGAGGTTTTATCAGGAGTTAATACTGCCCATATTTTGGACCCATCATGTGAGTGGCTTGATACTGAAACATCATCACCGATTAAAAAATATCCCAGCACGAATTTTCTAAATACTCGTCTCAAATTGCCATCCTTGAGCTGTCGAAGTTATGTATACTTCCTCTGCGGTTTATGGGCCAATGATGAAAATGTTCGCACTGCATTACATATCCGTCAGGGAAGTATAGGAAAATGGCGTCGTTGTACGTTTGATATACCTCACAAGAAGGATATCCCAAGCAGTTTTGAGTATCATGTAAATCTCAGCAGAATGGGCTATCGTTCGCTCATATACAGTGGCGATCATGACCTTTTGGTTCCTTTCTTGGCAAGTCAAGCATGGGTCAAATCTTTAAATTACTCCATTGTGGATGATTGGAGACAATGGTATACAAATGGCCAAGTTGCAGGATACACCAGGACTTACTCCAATCGAATGACATTTGCAACTGTGAAGGGTGGAGGCCACACAGCTCCAGAGTACAAACCTGAACAATGCCTTGCCATGTACAGTAGATGGCTATCTAACAGAGCTTTGTAA 1446 0.4136 MEMLERETPLKMVNFSASYSNYSFMCYGLLLLLLLSLFFFQFAWCGSTVKFLPGFEGPLPFVLETGYVGVGESEDVQAFYYFIESENNPKEDPLMLWLTGGPGCSALSGLVLEIGPLGFKYEEYDGILPNLFYRQHSWTKVSSIIFVDLPVFTGFTYATTESAAQRSDWILVHQLHQFLRKWLIDHPTFLSNQVYIGGDSYSGIPIPVIVQEISQANEKGVQPWINLQGYLLGNAATTGSEYNYRIPFSHGMGLISDELYESLQKNCKGEYTKVDEKNVLCSRDMESFNEVLSGVNTAHILDPSCEWLDTETSSPIKKYPSTNFLNTRLKLPSLSCRSYVYFLCGLWANDENVRTALHIRQGSIGKWRRCTFDIPHKKDIPSSFEYHVNLSRMGYRSLIYSGDHDLLVPFLASQAWVKSLNYSIVDDWRQWYTNGQVAGYTRTYSNRMTFATVKGGGHTAPEYKPEQCLAMYSRWLSNRAL* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1138 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 480 IPR001563 GO:0004185|GO:0006508
Vra10g1138 481 Gene3D - 343 480 - -
Vra10g1138 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Vra10g1138 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Vra10g1138 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 182 207 IPR001563 GO:0004185|GO:0006508
Vra10g1138 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 448 461 IPR001563 GO:0004185|GO:0006508
Vra10g1138 481 PANTHER 1-O-ACYLGLUCOSE:ANTHOCYANIN ACYLTRANSFERASE 25 480 - -
Vra10g1138 481 Pfam Serine carboxypeptidase 53 478 IPR001563 GO:0004185|GO:0006508
Vra10g1138 481 Gene3D alpha/beta hydrolase 46 314 IPR029058 -
Vra10g1138 481 SUPERFAMILY alpha/beta-Hydrolases 49 479 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1138 Vra-Chr10 17066851 17072149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1138 43 72 Calmodulin-binding Proteins AT2G22960 73.333 4.80e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1138 K16296 - gmx:100792006 811.601