Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1134 ATGCCTAAGCAAATTCACGAGATTAAGGACTTTCTTCTCACAGCCAGAAGGAAGGATGCGAGGTCCGTGAAGATTAAGAGGAGCAGAGATGTGGTTAAGTTCAAGGTTAGATGCTCCACGTACCTCTACACACTCTGTGTGTTTGACCCAGAGAAAGCTGATAAATTGAAGCAGTCACTTCCTCCAGGTTTGAGTGTTCAAGACCTGTAA 210 0.4476 MPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSTYLYTLCVFDPEKADKLKQSLPPGLSVQDL* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1134 69 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
Vra10g1134 69 Gene3D - 1 69 IPR038464 -
Vra10g1134 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 - -
Vra10g1134 69 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1134 Vra-Chr10 17039522 17040792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1134 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 94.203 2.21e-43 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1134 K02923 - gmx:100805669 138.272