Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1112 ATGAGGAGAAACTGCAACTTGGAACTTGCCCTTTTCCCTCCCTCCGATTCTGGCCCTCTCCACCATCCCAGCAGGGTTCAAGACGCTACGGAGATCAGTCCGCTCGATCACCATCACCGCCAGGAACACCAACAACAACCACTCACAATTTTCTACGATGGCAAGATTTGTGTTGCAGATGTCACCGAGCTTCAGGCTAAATCTATTTTAATGCTTGCAAATGGAAAATTGGAAGAAAGAATGAGGACTGGAAGTGGGTCAGAAGCATCTTCTCCAACAGTTTTGCAATCTCCTAATCAATTGTATAGTCCTGGCAGTGGCCTTTCTATGAGAAAATCGTTGCAACGCTTCCTTCTCAAGAGAAAGAATCGGGTTCAAGAAGCTTCTCCATACCATCACTAG 402 0.4627 MRRNCNLELALFPPSDSGPLHHPSRVQDATEISPLDHHHRQEHQQQPLTIFYDGKICVADVTELQAKSILMLANGKLEERMRTGSGSEASSPTVLQSPNQLYSPGSGLSMRKSLQRFLLKRKNRVQEASPYHH* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1112 133 ProSiteProfiles Tify domain profile. 41 75 IPR010399 -
Vra10g1112 133 MobiDBLite consensus disorder prediction 80 108 - -
Vra10g1112 133 Pfam Jas motif 111 131 IPR018467 -
Vra10g1112 133 MobiDBLite consensus disorder prediction 84 108 - -
Vra10g1112 133 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 133 IPR040390 -
Vra10g1112 133 SMART tify_2 41 75 IPR010399 -
Vra10g1112 133 PANTHER - 1 133 - -
Vra10g1112 133 Pfam tify domain 44 74 IPR010399 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1112 1 132 Tify Gene Family AT1G30135 41.429 9.00e-23 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vra10g1112 tify 7.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1112 - - gmx:100500349 216.468