Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1093 ATGACCCCTCTCTTATCCTCTTTCTCCCTCACCGACATAGCCTCCTACCTCGTATGCTTCCTCCTCCTCCTCATTCTCCTCGAACAGATCTCCTACCTTGCCAAGAAGGCCTCCATCCCAGGACCCTCCTTCGTCGTCCCCTTCCTTGGAAACGCAATCCCATTGGTCCGCAATCCAACCAACTTCTGGGACCTTCAGTCCTCTTTGGCAAAGTCCACCCCTTTAGGCTTCTCCGCTAACTACATAATCGGCAACTTCATCGTTTTCATCAGAGACACCGAACTCTCCCACAAGGTCTTCGCCAATGTCAGGCCCGACGCTTTCCATCTTGTCGGCCACCCCTTCGGTAAGAAGCTATTCGGCGAACACAACCTCATCTACATGATGGGTCAAGAACACAAGAATCTCCGCCGTCGCATCGCCCCCAACTTCACCCCCAAAGCCCTCTCCACCTACACCGCGCTCCAGCAGATTATCATCCTTGATCACCTCAAGTCCTGGGTTGCCAAAGCTCAATCCCAAACCGATTCCATTCCGCTCCGTATTCTGGCCCGTGACATGAATCTCGACACCTCCCAGACCGTCTTTGTCGGCCCCTACTTGGGCCTCAAAGCCAGGGAGCGCTTCGAGAGGGATTACTTTCTATTCAACGTTGGCCTTATGAAGCTTCCGATTGATTTCCCCGGCACCGCGTTTCGAAACGCGAGGCTCGCCGTGGACCGGCTCATCCAAACGCTGGCCACCTGCACCGAGATGAGCAAAACCAGGATGCAGAAAAGGGAAGAGCCTTCCTGTCTGATTGATTACTGGATGCAGGAAACGCTCAGGGAAATCGAGGAGGCCAAGCTCACCGGAGAGCCGGCGGCACCGTTCTCCACCGACGCCGAGATTGGTGGTTACCTCTTTGATTTTCTCTTTGCGGCGCAGGACGCGTCCACGTCATCGTTGCTGTGGGCGGTGGCGCTGCTGGATTCGCATCCGGAGGTGCTGGCGAAGGTTAGGGCAGAGGTGGCAGGAGTCTGGTCGCCGGAGTCGGACGAGCTGATTACGGCGGAGATGCTCCGGGAGATGAAGTATACGCAGGCGGTGGCTCGTGAAGTAGTGAGGTTCCGGCCGCCGGCGACGCTGGTGCCGCATATCGCGGCTGAGAGATTTCCGCTGACGGAGTCGTACACGATACCGAAGGGGGCGATCGTGTTCCCGTCGGCGTTCGAGTCGTCGTTTCAGGGGTTCAGTGAACCGGAGCGGTTCGACCCGGAGCGGTTCTCGGAGGAGAGACAGGAGGACCAAGTATTTAAAAGAAACTTTCTGGCCTTTGGTGCTGGGCCCCACCAGTGTGTGGGTCAAAGGTACGCATTGAATCATCTGGTTCTGTTCATCGCGTTGTTCGCCACGTTGATCAATTTCAAGAGGGACAGAAGGGACGGTTGTGATGAGATCGCGTACGTACCCACCATATGCCCTAAAGACGATTGCAGGGTGTTTCTCTCGCAACGCTGCACACGATATCCTTCCTTCCCTGCGCTGGAAGACCTGATGAAATGA 1545 0.5605 MTPLLSSFSLTDIASYLVCFLLLLILLEQISYLAKKASIPGPSFVVPFLGNAIPLVRNPTNFWDLQSSLAKSTPLGFSANYIIGNFIVFIRDTELSHKVFANVRPDAFHLVGHPFGKKLFGEHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTALQQIIILDHLKSWVAKAQSQTDSIPLRILARDMNLDTSQTVFVGPYLGLKARERFERDYFLFNVGLMKLPIDFPGTAFRNARLAVDRLIQTLATCTEMSKTRMQKREEPSCLIDYWMQETLREIEEAKLTGEPAAPFSTDAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVRAEVAGVWSPESDELITAEMLREMKYTQAVAREVVRFRPPATLVPHIAAERFPLTESYTIPKGAIVFPSAFESSFQGFSEPERFDPERFSEERQEDQVFKRNFLAFGAGPHQCVGQRYALNHLVLFIALFATLINFKRDRRDGCDEIAYVPTICPKDDCRVFLSQRCTRYPSFPALEDLMK* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1093 514 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 Gene3D Cytochrome P450 32 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PANTHER CYTOCHROME P450 26 17 496 - -
Vra10g1093 514 PANTHER CYTOCHROME P450 61 17 496 - -
Vra10g1093 514 Pfam Cytochrome P450 41 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Vra10g1093 514 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra10g1093 514 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1093 Vra-Chr10 16651382 16655976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1093 13 506 Cytochrome P450 AT2G34500 67.004 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1093 K09832 - gmx:100808148 917.146