Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g1092 ATGAGCGAGAAGAGGGAAAATAAGGAAATGGTGAGCGACGACAACAACCCTTATTATGGCACATTCCAAGGCGTCACCAATTGTTATCCTCCGTCTTTTCCCTCCGCTTATCACCAACAACAACCGTATCATTTTCTTCCAGTTTATGCTGTTCCTGACAGGCCATTGAGAGAACGTCGACTTCCCTGTTGTGGACTTGGTGTGGGATGGCTTTTGTTCATAATTGGTTGGTTTCTTGGTGGTGTTCCTTGGTACATTGGAACTTTTGTTTTGGTATTTGTGCAAATGGATCATAGAGAAAAACCTGGACTCATTGCATGTGCATTGGCTTCGTCGGTTACTTTGATGGTGGTTGCCCTTGGTGTCACACAGGCAGATCTTCAAAAGTTGATATGA 396 0.4419 MSEKRENKEMVSDDNNPYYGTFQGVTNCYPPSFPSAYHQQQPYHFLPVYAVPDRPLRERRLPCCGLGVGWLLFIIGWFLGGVPWYIGTFVLVFVQMDHREKPGLIACALASSVTLMVVALGVTQADLQKLI* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g1092 131 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 125 IPR044804 -
Vra10g1092 131 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g1092 Vra-Chr10 16635164 16636398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g1092 5 123 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 31.383 2.85e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g1092 - - var:108342711 247.669