Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0991 ATGATCTCTTTAACGAAATGCTCAGCGTCATCGCTCACTTGTTCTTCTTTCTCAACCAGAAAACTTCCCCTGGCAAGGCCTCAACTTCTCACATTACCAACCATTAACAACGTTGAACAAAGCACAAATCCCTCTCGGTTGTGCTCCCAGAAACCGCTCTACCTTTCATCCACAGAGAGCTTGGCATTGGTGAAGAGAAAGAGGGTGACGGAATGCCAGGCCTATGAGGCTGACAGGTCACGCCCCATAGAGATTAACATTGAGCTGCCGGGTGAAGATGCTGCTCAGAGGGCGAAGATTGGGGTGTATTTTGCCACCTGGTGGGCTTTGAATGTGGTGTTCAACATCTACAATAAGAAGGTTTTGAATGCTTTTCCTTACCCCTGGCTCACCTCCACTCTCTCCCTCGCTGCCGGCTCCCTCATGATGTTAATCTCCTGGGCCACCAGAGTTGCTGAAGTCCCAAAAGTTAACTTCGATTTCTGGAAGGCCTTGTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCTGCAACTGTGAGCATGTCCAAGGTTGCTGTCTCTTTCACTCACATCATCAAGAGTGGAGAGCCTGCTTTCAGTGTCTTGGTGTCAAGGTTCTTGCTTGGGGAAGCATTCCCAATGCCGGTCTATCTGTCACTGGTGCCAATCATTGGCGGTTGTGCACTAGCTGCTGTAACTGAACTCAATTTCAACACGATTGGCTTCATGGGGGCTATGATATCCAATTTGGCATTTGTCTTCAGGAATATATTCTCAAAGAAAGGAATGAAGGGGATGTCTGTTAGTGGAATGAACTACTATGCCTGTCTTTCCATAATGTCTCTGTTGATCCTCACACCTTTTGCCATTGCTGTTGAAGGCCCCAAGGTTTGGGCTGCAGGCTGGCAATCAGCTGTGTCTCAGATTGGTCCAAATTTTGTATGGTGGGTAGCTGCTCAGAGTGTCTTCTATCACTTGTACAATCAAGTTTCTTATATGTCTCTCGATCAGATTTCTCCCTTAACATTCAGCATTGGAAACACAATGAAAAGGATTTCGGTCATCGTCTCTTCTATTCTTATATTTCACACCCCTGTTCAGCCCATCAATGCTCTTGGTGCTGCCATTGCAATTCTTGGCACCTTCCTCTATTCACAGGCCAAACAGTGA 1176 0.4694 MISLTKCSASSLTCSSFSTRKLPLARPQLLTLPTINNVEQSTNPSRLCSQKPLYLSSTESLALVKRKRVTECQAYEADRSRPIEINIELPGEDAAQRAKIGVYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVAEVPKVNFDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMPVYLSLVPIIGGCALAAVTELNFNTIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSIMSLLILTPFAIAVEGPKVWAAGWQSAVSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPVQPINALGAAIAILGTFLYSQAKQ* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0991 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 388 - -
Vra10g0991 391 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 390 IPR004696 GO:0016021|GO:0022857|GO:0055085
Vra10g0991 391 Pfam Triose-phosphate Transporter family 99 387 IPR004853 -
Vra10g0991 391 PANTHER SOLUTE CARRIER FAMILY 35 29 390 - -
Vra10g0991 391 PANTHER GLUCOSE-6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 29 390 - -
Vra10g0991 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0991 Vra-Chr10 15670164 15672569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0991 36 391 Antiporters AT1G61800 80.618 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0991 K15283 - gmx:100804205 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0991 10 15670164 15672569 Vra10g0991 10 15670164 15672569 ECH
Vra7g3092 7 50574308 50581466 Vra10g0991 10 15670164 15672569 PCT