Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0964 ATGAAGCCTGAAGGAGCATTTGCTTCCACATTGAAGATGGCTGAGGCTACACAGTCTAATGCTGAGTTGTTGGAGTGGCCAAAGAAAGATAAGCGCCGCTTCCTGCATGCTGTGTACCGTGTTGGTGATCTTGATCGCACCATTAAGTTTTACACTGAATGTTTTGGGATGAAGCTTTTGAGGAAAAGAGATGTTCCAGAAGAGAAATTTGCCAATGCCTTTCTTGGATATGGCCCTGAACAATCCCATTTTGTTGTGGAATTGACTTATAATTATGGGGTGACCTCATATGATATTGGAACTGGCTTTGGGCATTTTGGTATTTCAACTCCAGATGTTTACAAATTGGTTGAAAACATCCGGGCCAAGGGTGGAAATATCACTAGGGAGCCTGCTCCCGTTACGGGTGGGACATCTGTTATTGCCTTTGTGAAGGACCCTGACGGTTATATTTTTGAGCTCATCCAAAGACCTTCAACCCCTGAACCATTGTGCCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCAATAAAATTTTATGAAAAGGCTTTAGGTTTGAGGGTCGTAAAGAGGGCTGATAGACCTCAACAAAAGTATACTATAGTCCTGCTTGGGTACGCAGACGAGCAAGAGACAACTGTGTTGGAGCTTACGTATAACTATGGTGTTACTGAATACACCAAGGGAAATGCTTATGCACAGGTTGCTATAAGTACGGACGACGTATACAAGAGTGCTGAGGTTGTGAACATAGTCACACAAGAGCTTGGAGGAAAGATTACTCGGCAACCAGGGCCAATTCCTGGACTTAACACAAAGATCACTTCTTTCGTAGACCCTGATGGATGGAAAACTGTTTTGGTTGACAATGAAGATTTTCTGAAGGAACTGGAGTGA 900 0.4344 MKPEGAFASTLKMAEATQSNAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKFANAFLGYGPEQSHFVVELTYNYGVTSYDIGTGFGHFGISTPDVYKLVENIRAKGGNITREPAPVTGGTSVIAFVKDPDGYIFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVVKRADRPQQKYTIVLLGYADEQETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNIVTQELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNEDFLKELE* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0964 299 ProSitePatterns Glyoxalase I signature 1. 166 187 IPR018146 GO:0004462|GO:0046872
Vra10g0964 299 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 164 290 IPR029068 -
Vra10g0964 299 TIGRFAM glyox_I: lactoylglutathione lyase 20 166 IPR004361 GO:0004462|GO:0046872
Vra10g0964 299 TIGRFAM glyox_I: lactoylglutathione lyase 164 294 IPR004361 GO:0004462|GO:0046872
Vra10g0964 299 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 23 299 - -
Vra10g0964 299 ProSitePatterns Glyoxalase I signature 2. 100 112 IPR018146 GO:0004462|GO:0046872
Vra10g0964 299 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 33 157 IPR037523 -
Vra10g0964 299 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 35 154 IPR004360 -
Vra10g0964 299 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 166 285 IPR004360 -
Vra10g0964 299 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 163 291 IPR037523 -
Vra10g0964 299 PANTHER LACTOYLGLUTATHIONE LYASE 23 299 - -
Vra10g0964 299 Gene3D - 6 158 IPR029068 -
Vra10g0964 299 Gene3D - 160 299 IPR029068 -
Vra10g0964 299 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 32 161 IPR029068 -
Vra10g0964 299 CDD GlxI_Ni 35 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0964 Vra-Chr10 15424731 15428287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0964 166 290 Calmodulin-binding Proteins AT1G08110 29.333 6.63e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0964 K01759 - gmx:100799447 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0964 10 15424731 15428287 Vra10g0964 10 15424731 15428287 ECH
Vra7g3058 7 50342112 50345616 Vra10g0964 10 15424731 15428287 PCT