Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0915 ATGTTTGGAAATCAACACTCGGGACGAAGATTTGTCATGACTGTATGCTCTGACACTCTTCATATCATTGCTGTAAAATACACTTGTTTTCTAGGTTCAATGGCGGGGTCATGTTTCCACGGACTTAGGCTAAGGATGTCTAAGAGTAAACCTTTACCAGAGCCTTCATCTTCCTCCAAGTTACGGTTGGAGAGTGACACGGAGAACATGGAAAGGAAGAGATTTAATAGCACGGAATCGTGGTCCATGATATTGGACTCGATGGATACATGGGAGGCTTCAAAGGAGGACGAGCAAGAGGAATGGACTGCAGACCTATCACAGCTTTTTATTGGTAACAGGTTTGCTTCTGGAGCTCACAGTCGAATTTACCGTGGAGTCTACAAGCAGAGAGCTGTTGCTGTGAAAATGGTGAAGATGCCATTCCAGGATGAGGAGAAAAAGGAATTATTAGAGGAGCAATTTAACTCTGAAGTGGCTTTGCTTTCACGTCTCTTCCATTTTAACATTGTGCAGTTCATTGCAGCATGTAAAAAACCGCCGGTGTACTGTATCATAACAGAATACATGTCACAAGGGAATCTAAGGATGTATCTGAACAACAAAGAGCCATACTCACTCTCAATGGAAAGAATAGTAAGGTTTGCTCTAGATATATCAAGGGGCATGGAGTACCTTCATTCACAAGGTGTGATTCACAGAGACTTGAAATCAAGTAATTTGCTCCTCGACGATGATTTGAGGGTTAAGGTGGCGGATTTTGGCACATCTTGTCTTGAAACAAGATGCCGCAAAAGCAAAGGGAACTCGGGAACGTATCGTTGGATGGCACCAGAGATGCTTAAGGAAAAACCTTATACTCGAAAAGTTGATGTCTACAGTTTTGGTATTGTGCTTTGGGAGCTCACTACTTCTCTACTTCCTTTCCAAGGAATGACCCCAGTGCAAGCTGCTTTTGCTGTGGCTGAGAAGAATGAAAGGCCTCCTCTGCCAGCAAGTTGTGAACCAGGACTAGCACATCTGATAAAGCGTTGCTGGTCAGTAAACCCGTCGAAACGGCCAGATTTCAGTGACATTGTGTGTACGTTGGAGAAGTACGATGAGTGTATGAAGGAAGGCGTACCAATGAGCCATCATTCAGGGCTACTCAGCAGAAATGTAATTGTCGAACGCCTCAAAGGCTGTGTATCAATGACCTCCTCCATACCTGTCTATGCATGA 1221 0.4406 MFGNQHSGRRFVMTVCSDTLHIIAVKYTCFLGSMAGSCFHGLRLRMSKSKPLPEPSSSSKLRLESDTENMERKRFNSTESWSMILDSMDTWEASKEDEQEEWTADLSQLFIGNRFASGAHSRIYRGVYKQRAVAVKMVKMPFQDEEKKELLEEQFNSEVALLSRLFHFNIVQFIAACKKPPVYCIITEYMSQGNLRMYLNNKEPYSLSMERIVRFALDISRGMEYLHSQGVIHRDLKSSNLLLDDDLRVKVADFGTSCLETRCRKSKGNSGTYRWMAPEMLKEKPYTRKVDVYSFGIVLWELTTSLLPFQGMTPVQAAFAVAEKNERPPLPASCEPGLAHLIKRCWSVNPSKRPDFSDIVCTLEKYDECMKEGVPMSHHSGLLSRNVIVERLKGCVSMTSSIPVYA* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0915 406 PRINTS Tyrosine kinase catalytic domain signature 187 200 IPR001245 GO:0004672|GO:0006468
Vra10g0915 406 PRINTS Tyrosine kinase catalytic domain signature 225 243 IPR001245 GO:0004672|GO:0006468
Vra10g0915 406 PRINTS Tyrosine kinase catalytic domain signature 271 281 IPR001245 GO:0004672|GO:0006468
Vra10g0915 406 PRINTS Tyrosine kinase catalytic domain signature 290 312 IPR001245 GO:0004672|GO:0006468
Vra10g0915 406 PRINTS Tyrosine kinase catalytic domain signature 334 356 IPR001245 GO:0004672|GO:0006468
Vra10g0915 406 SMART serkin_6 109 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra10g0915 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Vra10g0915 406 Gene3D Phosphorylase Kinase; domain 1 98 191 - -
Vra10g0915 406 CDD STKc_MAP3K-like 116 360 - -
Vra10g0915 406 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 42 394 - -
Vra10g0915 406 Pfam Protein tyrosine and serine/threonine kinase 112 362 IPR001245 GO:0004672|GO:0006468
Vra10g0915 406 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 42 394 - -
Vra10g0915 406 ProSiteProfiles Protein kinase domain profile. 109 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vra10g0915 406 MobiDBLite consensus disorder prediction 48 69 - -
Vra10g0915 406 Gene3D Transferase(Phosphotransferase) domain 1 192 385 - -
Vra10g0915 406 SUPERFAMILY Protein kinase-like (PK-like) 87 363 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0915 Vra-Chr10 15029810 15034351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0915 34 397 MAP Kinase Kinase Kinase AT1G62400 75.798 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Vra10g0915 PK_Tyr_Ser-Thr 4.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0915 - - aprc:113845847 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3028 7 50111639 50114422 Vra10g0915 10 15029810 15034351 PCT