Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0891 ATGCATTTGATGAAGGGGAAATCAGAAAGAATGCAAACGTCCCAGAAACACCCAACTTCATCCGGTTTCGATTTATACCACCAGCCTGTGCAAAACGTGGATCCCTACACTCGTTACCAAGTATTGCAAAGCAATTCTTGCCATGAAATCCATAATAGCAACAGTCAGGGAACCACTATCTCGTTTCAACCCTGCAAGGAGCAATACTTTACCCTTGAATCATCCCCAGCACTCAATGATCTCATAGGTTGTGATTCTCCTTCCTATGCTAGTGTATCGTCCAATTCCAACAGAAGTCCTTTTTCTCCGCATGCTTCTCATTCATACCATTCAGACCAGCATCAGTCATCTGACAATAACTATGGATCACCAACGAGTGCACACTCCAGTGCTGATGATAGCTATGAACTGAAGCACAAGCTCAGAGAACTTGAGATTTCACTGTTGGGGCCTGATTCAGAAATTGTTGACAGTTGTCACTGCTGCTACGAGGGTGGCCACCACGGAGCGTCAGCAATGGCTAAATACAACTGGGATCAGGTTGTAGAAATGATTCCAAAACTAGACTTGAAAGAAGTCCTCAGTCGGTGTGCACAGGCTGTATCTGACGGTGATATTGAAACAGCGGTGGGATTTATGAATAATGTATTGCCAAAAATGGTATCAGTAGGAGGTGATCCAATCCAGAGGTTAGGGGCCTACATGTTGGAGGGTCTGAGAGCAAGGTTGGAGTCTTCAGGGAGCCTAATATACAAAGCCTTGAAATGTGAACAACCAGCAAGCAAAGATCTCATGAGTTACATGCACATCTTGTACCAGATTTGCCCATATTGGAAGTTTGCTTATGTATCTGCCAATGCTGTCATTGGAGAAGCAATGCTAAATGAATCAAGAATCCACATAATTGACTTCCAAATTGCACAGGGCACTCAGTGGATGCTGCTTATTGATGCTCTTGCATCTCGTCCTGGTGGAACACCTTTCATTCGTGTAACTGGTGTGGATGATTCCGAATCCTTTCATGCAAGAGGAGGAGGACTTGACATTGTAGGAAAACGCCTCTCAGATTATGCCAAATCCCGTAGAGTTCCATTTGAGTTCCACAGTGCAGCAATGTCTGGATGCGAGGTTGAACTAGAAAACCTTGTGGTTCTACCGGGGGAAGCTCTGGCTGTGAATTTCCCTTTTGTTTTGCACCACATGCCAGATGAGAGTGTGAGCACAGAGAACCACAGGGACAGGCTACTAAGACTGGTTAAGAATTTATCACCCAAGGTTGTGACACTCGTTGAGCAAGAATCCAACACCAACACTTCCCCCTTTTTCCAAAGGTTTGTTGAGAGCTTGAGTTATTATAGTGCAATGTTTGAGTCAATAGACGTGGCCCTGCCCAGAGAGGATAAGCAAAGGATCAGTGCTGAACAACACTGTGTGGCTCGTGACATAGTTAACATGATAGCTTGTGAGGGGCCTGAGAGGGTGGAAAGGCATGAACTGTTGGGGAAGTGGAGGTCAAGATTTTCAATGGCTGGTTTTGCACCATGCCCTTTGAGTTCCTCAGTCACCAATGCCGTTAGAAACATGTTAAGAGAGTTTAATGGAAATTATAGGCTAGAACATATAGATGGTGCGCTGTATTTAGGATGGAAGAGAAGAGCCCTCTGTACATCTTCTGCCTGGAGATGTTACTGA 1692 0.4492 MHLMKGKSERMQTSQKHPTSSGFDLYHQPVQNVDPYTRYQVLQSNSCHEIHNSNSQGTTISFQPCKEQYFTLESSPALNDLIGCDSPSYASVSSNSNRSPFSPHASHSYHSDQHQSSDNNYGSPTSAHSSADDSYELKHKLRELEISLLGPDSEIVDSCHCCYEGGHHGASAMAKYNWDQVVEMIPKLDLKEVLSRCAQAVSDGDIETAVGFMNNVLPKMVSVGGDPIQRLGAYMLEGLRARLESSGSLIYKALKCEQPASKDLMSYMHILYQICPYWKFAYVSANAVIGEAMLNESRIHIIDFQIAQGTQWMLLIDALASRPGGTPFIRVTGVDDSESFHARGGGLDIVGKRLSDYAKSRRVPFEFHSAAMSGCEVELENLVVLPGEALAVNFPFVLHHMPDESVSTENHRDRLLRLVKNLSPKVVTLVEQESNTNTSPFFQRFVESLSYYSAMFESIDVALPREDKQRISAEQHCVARDIVNMIACEGPERVERHELLGKWRSRFSMAGFAPCPLSSSVTNAVRNMLREFNGNYRLEHIDGALYLGWKRRALCTSSAWRCY* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0891 563 MobiDBLite consensus disorder prediction 93 134 - -
Vra10g0891 563 ProSiteProfiles GRAS family profile. 181 561 IPR005202 -
Vra10g0891 563 MobiDBLite consensus disorder prediction 1 26 - -
Vra10g0891 563 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 30 560 - -
Vra10g0891 563 Pfam GRAS domain family 191 561 IPR005202 -
Vra10g0891 563 MobiDBLite consensus disorder prediction 93 131 - -
Vra10g0891 563 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 560 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0891 Vra-Chr10 14804634 14808242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0891 11 561 GRAS Transcription Factor Family AT4G17230 58.333 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vra10g0891 GRAS 1.6e-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0891 - - gmx:100819190 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra7g3009 7 49954091 49957079 Vra10g0891 10 14804634 14808242 PCT