Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0883 ATGTCTGGTGGGGAGGTAGGTGGTGGGAGTGTTTTTGTGGCCTGGGAGGAGCAGGTGATATGCCAGGAGCGTGGGAACCGAGTGATTCACTTCTATCTGAAGGATGCGTCAGGAAATTCGGTGCTGGCCGTTGTGGGGACCGAGAGGAGTGTGAGGCACATGATGTATGTTGTCCCTGACCATTTCTTGCAGGCCTATGGATCCACACAGCCAATCAATGCCTGCAAGTGGAGGGCACGGCGTGAGGTTGTTGACTGGCTTACTTGTTTGGTCTCCAGGAATAGGTCACACCATGCAGGTGTTCAATTGGATGAATTAGCACAAATTGATGAATCTCTCAAAATTTTAGTGCCTGGAATTAATGTCAGTAATAAGATTTTACCTGATAAAATGATTTCTAGGAAACTAAAATTCCAAACTTCGGATATTGAATGGTCAGGCAGTACTTGGTTTTGTGCTAAACAGCTGAAGCACTACTCAGGGTTTTGCAGGAATGGAACAACCATAAATGTTCATTCATTTGTGTGTATTATGGCTGAAGAAGAAAACCACTATCTTGGTTACTTGGAAGATATGTATGAAGACAAGAAGAGACAAAAAAAGGTGAAGGTGCGTTGGTTTCATCATGGTCAGGAAGTTAAGCAGGTGATTCCACAGCTGATTCTGCAAGAGGGAGAGGTTTTCATCACACCTCATGTTCAGGTGATCAGTGCTGAGTGTGTTAATGGTCCTGCGACTGTTTTGACTCCTAAGCATTATGAGAAATACCTGGCTGCTGTTCCTCATACATCTTTATCCGAGATCCATACGTGCTTTAGGCAGTTTAAAAACAATAGGCTTAAGCCCTTCACACTTACAAAGTTGCGTGGGTATAGTAGCCAGCCTGTTCTTTCTTGTTTAAATAGTCCTATTCTCTCCAAGAGAAAGGCAAAGTTTGAAAAGTCACACACAGATGATGATGAGAACTTCACTCAAGATGATCCTTTAAGGTCCAGCAATAAGAGGATTAGAAGTTCTAAGGATCACATATTTGAGAAGGGTTTTTCTGGTCTGCAAGTCTCTGTTCCTACCAATGAAATGACAAAATGTGGACTGAAATATCCTAGTTTAAAATTAAAACTATCAAGAAAAACAGTAGGTATTAAGGTTATTGGACCAAAGCCTAAACTTTCTTTTCAGGTCGGTGCTAAGATAGAGGTTCTTTGTCAAGATAGTGGCATTAGAGGATGCTGGTTTAGATGTAAAATCTTGAGCATGTCTCCGAGGCTGCTGAAGGTCCAGTATGATGATTTGCTTGATATAGACGGAGCACAGAAACTAGAGGAATGGGTCCCTGCATCTAGAGTGGCAGCTCCTGATAAATTGGGTATGCGATGTTCAGGCCGCTTAACAGTCCGGCCATGCCCTCCTGAATACAATTCAGATCGCACTTTTGAGATTGGAGCAGCAGTGGATGCCTGGTGGTGTGATGGATGGTGGGAAGGGGTCATAACTGCAGTTAATGTCAGCGGAGATGGAATCCTGCAAGTTTATACCCCTGGTGAAGAGAGGTTCCTAAAGGTGGAGCAGAAGAACATTCGGATTTCCCGAGATTGGATCAATAACAGATGGATTGATATACGAGGAAAGCCTGACATTTGCACTTATTTAACTTCAAATGTCAGGTCCAGCATCGGGATGTCAGCTAATTCTGCAGTGGTTGATGGATCCATGTCTGATTGCTCTGCTTTAGAAAGTAAATCATCATCAATTCCCAAAGTTGAACTTGCTAAGAAGGTTGAACCGGAATCGTCTGGTTTGGAAATCCATGTTGATCTGGAAAATATGAAGGGAATAACTCTGAGGGAGCCACTCTATGCCATTCATGAGGACAAGGATAACTCTGGTGGTGGCTGTGATGATGAAGCTGACAAGGCTGTGAAGACACTTCAGACCATAAATGAACACAAGGATAATAACTCTTGTAGTGATGATGACACTGAGGATGATGATAATGTCAATGGTGATGATGTTGACAACGGGGAGGCCAGTGAGGAAAATTTTGATTGTTGTGAACCAAAAGTTGATGCAGCAGAAGCAATACAAGTTGCATAA 2094 0.4298 MSGGEVGGGSVFVAWEEQVICQERGNRVIHFYLKDASGNSVLAVVGTERSVRHMMYVVPDHFLQAYGSTQPINACKWRARREVVDWLTCLVSRNRSHHAGVQLDELAQIDESLKILVPGINVSNKILPDKMISRKLKFQTSDIEWSGSTWFCAKQLKHYSGFCRNGTTINVHSFVCIMAEEENHYLGYLEDMYEDKKRQKKVKVRWFHHGQEVKQVIPQLILQEGEVFITPHVQVISAECVNGPATVLTPKHYEKYLAAVPHTSLSEIHTCFRQFKNNRLKPFTLTKLRGYSSQPVLSCLNSPILSKRKAKFEKSHTDDDENFTQDDPLRSSNKRIRSSKDHIFEKGFSGLQVSVPTNEMTKCGLKYPSLKLKLSRKTVGIKVIGPKPKLSFQVGAKIEVLCQDSGIRGCWFRCKILSMSPRLLKVQYDDLLDIDGAQKLEEWVPASRVAAPDKLGMRCSGRLTVRPCPPEYNSDRTFEIGAAVDAWWCDGWWEGVITAVNVSGDGILQVYTPGEERFLKVEQKNIRISRDWINNRWIDIRGKPDICTYLTSNVRSSIGMSANSAVVDGSMSDCSALESKSSSIPKVELAKKVEPESSGLEIHVDLENMKGITLREPLYAIHEDKDNSGGGCDDEADKAVKTLQTINEHKDNNSCSDDDTEDDDNVNGDDVDNGEASEENFDCCEPKVDAAEAIQVA* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0883 697 MobiDBLite consensus disorder prediction 657 679 - -
Vra10g0883 697 Gene3D - 134 281 IPR043151 -
Vra10g0883 697 PANTHER BROMO ADJACENT-LIKE DOMAIN PROTEIN 10 594 - -
Vra10g0883 697 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Vra10g0883 697 SMART agenet_At_2 390 455 IPR014002 -
Vra10g0883 697 SMART agenet_At_2 476 534 IPR014002 -
Vra10g0883 697 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 594 - -
Vra10g0883 697 Pfam Agenet domain 395 470 IPR008395 -
Vra10g0883 697 SMART BAH_4 167 286 IPR001025 GO:0003682
Vra10g0883 697 MobiDBLite consensus disorder prediction 311 334 - -
Vra10g0883 697 MobiDBLite consensus disorder prediction 647 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0883 Vra-Chr10 14748333 14758269 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0883 404 532 PHD Transcription Factor Family AT5G58610 27.820 1.51e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0883 - - vun:114188137 1308.12