Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0851 ATGATGTCAGGGAAAAAAAGACATGATTGTTTGCACCACGAATCCGATGAAGAAGGCTGTTGCGGTTTCATTCAGGTGTATGACTGCAGCGTCAATGAAGTAAACAATAAAGATTCAGAGGAGCTATTTGAGATCAATCTGAAGGAATCATTGGAGACAATATCAGAAGACTCTGAGAGTAGCGTGTTCTCTTTTGACATTCACAACAACAACGACACAGATGTTGTTCATGTGGCAGTAGACCACGTTGGAGAATCAAGCATGGAAGCCCTTTTATGGACTTTGAACCATGCTGTCAGACCCTCTACCACTGTCTATCTCAGACACGTTTTTCCTGAAATCAGGCTCATCCCAAGTCCATTTGGAAAATTTCCAAGGAATCGTGTAAATGCAGAGTATGTTAACTTTCACTTGACTCAACAGAAAGGCAAGAAAAAATTGCTCCTTCAAGAGTTCATTGACTTGTGCCTTGATTCAAAGGTTAAGGTGGAAGTGATGGTTGTAGAGGGTGACAACGTTGCCAAAGCAATAACAGAGCAAGTTAGAGATCATGATATAAGAAAATTAGTGATTGGAATCACCAAATCTAATTTAAGCAAATCCATGTCCAGAAGAAGAAATGGCATAGCAGATAAGGTCCTCAGAAATGCACCAGAAATCTGTGATGTTAAAATAATATGCGATGGAAATGAAGTAACAGATCAAATGATTACAAGTTCCAGAGTTGCACATGAAGAGAATGAATCATGTGGTTTTGTTCCTCTTATGCGTTTTGTGTCCAATCCCATATGGCTATTTAGACCCAGATTTTGA 813 0.3936 MMSGKKRHDCLHHESDEEGCCGFIQVYDCSVNEVNNKDSEELFEINLKESLETISEDSESSVFSFDIHNNNDTDVVHVAVDHVGESSMEALLWTLNHAVRPSTTVYLRHVFPEIRLIPSPFGKFPRNRVNAEYVNFHLTQQKGKKKLLLQEFIDLCLDSKVKVEVMVVEGDNVAKAITEQVRDHDIRKLVIGITKSNLSKSMSRRRNGIADKVLRNAPEICDVKIICDGNEVTDQMITSSRVAHEENESCGFVPLMRFVSNPIWLFRPRF* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0851 270 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 13 267 - -
Vra10g0851 270 Pfam Universal stress protein family 76 218 IPR006016 -
Vra10g0851 270 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 83 226 - -
Vra10g0851 270 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 13 267 - -
Vra10g0851 270 Gene3D HUPs 66 226 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0851 Vra-Chr10 14485282 14486866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0851 76 229 U-box Gene Family AT2G45910 27.742 7.55e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0851 - - gmx:100818837 407.912