Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0823 ATGGCTTCGGAGATTGAAATTTCTCCGGCCGACGCTCGCAAGGCTCCCGGCAAAGAGCAGCAAGCGGCCGGCGTCGGAATCCTTCTGCAGATCATGATGCTCGTCCTGTCCTTCGTCCTCGGTCACGTTCTCCGTCGCAAGAAGGTTTACATCATCCCCGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGCATTCTAGCAAACATTTCGGACACCGAGACTAGTATCAGGGCGTGGTTCAATTTTCACGAGGAGTTTTTCTTCCTGTTCCTGCTACCTCCTATCATATTTCAGTCCGGGTTCAGTCTCGCACCTAAACCCTTTTTCTCGAATTTTGGAGCAATAGTCACATTTGCTATATTCGGCACCTTTATAGCTTCAATTGTTACCGGTATCTTGGTTTATCTTGGTGGTTTGCTCTTTCTAATGTATAAGCTACCTCTCGTAGAGTGCCTGATGTTTGGTGCTCTTATATCAGCTACTGATCCTGTAACTGTTTTGTCCATATTCCAGGAGCTGGGCACTGATGTCAATCTATATGCCTTGGTTTTTGGGGAATCCGTTCTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATCTGTTAAAGCTCAGCCATCTGGACAAAATTTATTCATGGTGGTTGTTCGGTTTTTGGAGACTTTTGTTGGGTCAATGTCAGCAGGTGTTGGTGTTGGATTTATATCTGCTTTGCTATTTAAGTATGCAGGATTAGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTATTTGTCCTTTTCCCATATTTCTCGTACATGCTTGCTGAAGGTCTTGGTCTGTCTGGTATTGTTTCAATACTGTTCACTGGAATAGTCATGAAGCACTATGCGTATTCCAATTTGTCACAAAGTTCTCAAAGATTTGCTTCAGCCTTCTTCGAGTTGATATCATCTTTAGCTGAAACATTTGTATTTATATACATGGGCTTTGATATTGCTATGGAGCAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTTATTGGAATTGCAAGGGCTGCAAATGTCTTTTCTTGCGCTTATTTGGTCAATCTGGTCAGACCCAGTCATCGAAAGATACCTCCAAAACATCAGAAGGCACTTTGGTATAGTGGACTTCGAGGAGCAATGGCTTTTGCGCTTGCTCTGCAATCCGTTCATGATCTTCCAGAAGGACATGGGCAGACCATCTTTACTGCAACTACTGCAATAGTTGTCTTGACGGTATTGCTAATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTTGTAGGTGGTGATAATGATAGCCCTTTGTCTTCAGTTGGTACTATTACAAATTTTGATGGAAACAATGGTTATATTGCTCCTCCTTACAATGAAGAGTCATCTTCAGGGAACAAAATCAAGATGAAGCTAAAAGAATTCCACAAGAGTGCTGCATCCTTTACAGCAATTGATAAAAACTACCTCACCCCATTCTTTACAATTCAAAATGGAGATGAAGATGACGAAGCCGAGCCTTTTACATCGGGATTTCATGGGCAGAACCGTTATTCGACATGA 1596 0.4236 MASEIEISPADARKAPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKVYIIPEASASLLIGLIVGILANISDTETSIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFIASIVTGILVYLGGLLFLMYKLPLVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSSVKAQPSGQNLFMVVVRFLETFVGSMSAGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFASAFFELISSLAETFVFIYMGFDIAMEQHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPSHRKIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDNDSPLSSVGTITNFDGNNGYIAPPYNEESSSGNKIKMKLKEFHKSAASFTAIDKNYLTPFFTIQNGDEDDEAEPFTSGFHGQNRYST* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0823 531 MobiDBLite consensus disorder prediction 511 531 - -
Vra10g0823 531 Pfam Sodium/hydrogen exchanger family 33 436 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Vra10g0823 531 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 31 451 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra10g0823 531 PANTHER SODIUM/HYDROGEN EXCHANGER 6 13 516 - -
Vra10g0823 531 PANTHER SODIUM/HYDROGEN EXCHANGER 13 516 IPR018422 GO:0006812|GO:0015299|GO:0016021
Vra10g0823 531 PRINTS Na+/H+ exchanger signature 88 99 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra10g0823 531 PRINTS Na+/H+ exchanger signature 102 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra10g0823 531 PRINTS Na+/H+ exchanger signature 117 125 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra10g0823 531 PRINTS Na+/H+ exchanger signature 157 167 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Vra10g0823 531 Gene3D - 150 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0823 Vra-Chr10 14247787 14256352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0823 19 438 Antiporters AT3G05030 34.163 1.08e-53 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0823 K14724 - gmx:100790830 944.495