Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0819 ATGGCAGAAGAACTTAACCACTCTCTGGAATATACACCAACATGGATTGTTGCGGTTGTTTGCTGCATAATTGTTTTCATCTCTCTTTGTGTTGAACGTGCCCTTCACAAACTCGGAAACTACCTAAAGAGAAAAGGTCAGAAAGCACTGTATGAAGTCTTGACAAAATTGGAAGAAGAATTGATGCTTTTAGGGTTCATTTCCCTTCTATTAACCGTCTTTCAAGGTTTAATAAGCGAAATTTGCATCTCACCAAACCTTGCAACCCAAATGCTTCCATGCAAAAGGCCTCATAGGTCTTCAGAAGGTTCAGCGCATTATCAGATATACTATGATGCTATAATAAACAGAAGGAGGCTTTTGTCTAGTGGTTCTGGTTCAGATCATTGTACACATAAGGGTAAGGTTCCACTGTTATCATTGGAATCTTTACATCAGCTTCACATTTTTATCTTTGTATTGGCCGTTGTACATGCCATATTCTGTGTCACAACAATGCTTCTTGCAGGTGCAAAGATGCGGGAATGGAAGGTATGGGAGGATTATTATCGAGATCACAGTGAAGCAATAGATAAACATGAGTTCTTCAAAGAAAAAAGTCGAGGACATTGGAGAAAAGCAGCTGTTATTAGTTGGCTGATGTCATTCTTCAAGCAATTTCATGGCTCTGTTACAAAGTATGACTACTATGCACTTCGGTATGGATTTATCAAGAAACACCACTCAAATAACCTCAAGTATAATTTTCATAATTACATGCTGAGAACACTTGAAGTAGACTTCAAAAGAGTTGTTGGTATCAGCTGGTACCTGTGGGTCTTTGTTGTGCTGTTTTTGCTGTTGAACATTGAAGGATGGCACACTTATTTCTGGTTAGCCTTTTTACCCTTGATACTTCTACTTCTGGTGGGGGCAAAGTTGGAGCACATAATCGCTCGTTTGTATCAGGATTCAGTAGACATGTTGGGAAGAGATGATGACAAATTAGTGAAGCCATCAGATGAATATTTCTGGTTTACCAGCCCTCTCCTAGTCCTCCACTTACTTCACTTCATTTTGTTTCAAAACTCTTTTGAGATTGCATTTTTCTTCTGGATTTGGTGCACATATGGATTTGATTCATGCATTATGGAGAAAGTAGCCTACGTTATCCCAAGACTTATAATGGGTGTAATTGTTCAAGTGCTTTGCAGTTATAGCACCTTGCCTTTGTACACTATTGTGACTCAGATGGGTAGCGAAATCAAGCCTCAGAAGTTGCTTTCAAGTGACTCCCTCAATACACCGCATTCCAACTGTATGATCAAAGAATCAACCCAAACTGATGAACAAGCAATAATCATGGTGGAAGATGCAACATCTGCAATCGAGCTTGTTCCCTTGGAGAAACCTAACACATCCAACAGTTAA 1410 0.3936 MAEELNHSLEYTPTWIVAVVCCIIVFISLCVERALHKLGNYLKRKGQKALYEVLTKLEEELMLLGFISLLLTVFQGLISEICISPNLATQMLPCKRPHRSSEGSAHYQIYYDAIINRRRLLSSGSGSDHCTHKGKVPLLSLESLHQLHIFIFVLAVVHAIFCVTTMLLAGAKMREWKVWEDYYRDHSEAIDKHEFFKEKSRGHWRKAAVISWLMSFFKQFHGSVTKYDYYALRYGFIKKHHSNNLKYNFHNYMLRTLEVDFKRVVGISWYLWVFVVLFLLLNIEGWHTYFWLAFLPLILLLLVGAKLEHIIARLYQDSVDMLGRDDDKLVKPSDEYFWFTSPLLVLHLLHFILFQNSFEIAFFFWIWCTYGFDSCIMEKVAYVIPRLIMGVIVQVLCSYSTLPLYTIVTQMGSEIKPQKLLSSDSLNTPHSNCMIKESTQTDEQAIIMVEDATSAIELVPLEKPNTSNS* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0819 469 PANTHER MLO-LIKE PROTEIN 1 5 440 IPR004326 GO:0006952|GO:0016021
Vra10g0819 469 Pfam Mlo family 7 418 IPR004326 GO:0006952|GO:0016021
Vra10g0819 469 PANTHER MLO-LIKE PROTEIN 13 5 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0819 Vra-Chr10 14209646 14214914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0819 8 416 MLO family AT4G02600 55.658 3.32e-171 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0819 K08472 K01179 gmx:100792763 711.064