Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra10g0813 ATGGCCAACGAAAACACTGGCGACGAGGTTGTGTGCGTGACCGGCGCCAACGGTTTCATCGGTTCGTGGCTGGTTCGGACCCTCTTGGAGAACCAAAACCATAGCTACACCATCCACGCCGCCGTCTTCCCCGGTTCCGACGCCTCTCATCTCTTCACCCTCCACCCCACCGCTGCCTCCCGCATCACCGTCTTCCCCGCCGACCTCCTCGACGCCGCCGCCATCTTCCGCGCCGTCGCGGGATGCTCTGGCGTTTTCCACGTTGCGTCCCCCTGCACACTGGAGGACCCCGCGGACCCTCAAAGTGAGCTTCTAGAACCCGCGGTGCAGGGCACGCTGAACGTGCTCGAAGCCGCGAGGAGCGTGGGCGTGCGGCGCGTGGTGCTCACGTCCTCGATCTCCGCAATGGTGCCGAACCCGGGGTGGCCGGCGGGAAGGGTAGTGGACGAGGAGTCGTGGACGGACGTGGAGTTCTGCAGGGCGAGGGGGAAGTGGTACCCTGTGGCGAAGACGGAGGCAGAGAGGGCGGCGTGGAAGTTCGAGGGCAGTGTCGAGGTGGTGGCCGTCCTGCCGGCGACGTGTCTGGGTCCGTTGCTGCAGCCGGAGCTGAACGCGAGCTCCGGCGTGCTACAGAGGCTGATGATGGGGTCGAAGGAGACGCAGGAGTATCACTGGTTAGGTGCGGTGCATGTGAAGGACGTTGCTAAAGCTCATGTATTGCTCTACGAAACTCCCTCTGCTGCTGGTAGATATCTCTGCACCAATGGCATCTATCAGTTTTCTGGTTTTGCTGCCTCTGTCTCTGAATTGTACCCTGAATTCCCTATCCACAGGTTCCCAGAAGAAACACAACCTGGCCTGGTTCCTTGTAATGGCGCAGCAAGGAGACTAATAGACTTGGGCCTTGTCTTCACACCAATACAAGACGCTGTGAGAGAAGCAGCGGAGAGCCTTATAGCCAAAGGCTTCCTGCAGCGCTCACCCTCACAGAGGGGATCAGCATGTTCATGA 1011 0.6053 MANENTGDEVVCVTGANGFIGSWLVRTLLENQNHSYTIHAAVFPGSDASHLFTLHPTAASRITVFPADLLDAAAIFRAVAGCSGVFHVASPCTLEDPADPQSELLEPAVQGTLNVLEAARSVGVRRVVLTSSISAMVPNPGWPAGRVVDEESWTDVEFCRARGKWYPVAKTEAERAAWKFEGSVEVVAVLPATCLGPLLQPELNASSGVLQRLMMGSKETQEYHWLGAVHVKDVAKAHVLLYETPSAAGRYLCTNGIYQFSGFAASVSELYPEFPIHRFPEETQPGLVPCNGAARRLIDLGLVFTPIQDAVREAAESLIAKGFLQRSPSQRGSACS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra10g0813 336 Pfam NAD dependent epimerase/dehydratase family 11 247 IPR001509 -
Vra10g0813 336 Gene3D - 2 335 - -
Vra10g0813 336 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 317 IPR036291 -
Vra10g0813 336 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 314 - -
Vra10g0813 336 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 314 - -
Vra10g0813 336 CDD FR_SDR_e 11 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra10g0813 Vra-Chr10 14171238 14176212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra10g0813 9 324 Monolignol Biosynthesis Gene Families AT2G02400 64.577 1.41e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra10g0813 - - vra:106775739 662.529